Table 2

Hydrolases with signal peptides in one or more strains
	Gene present in three strains	CcI3 gi	ACN gi	EAN gi

Polysaccharolytic	Glycoside hydrolase, family 16	86742522	111222085	158319021^†
Esterolytic/Lipolytic	Patatin	86739488	111220771^‡,111222061^†	158317574, 158312853
	Poly(3-hydroxybutyrate) depolymerase-like*	86738795	111219601^†	158312237, 158318953
	Poly(3-hydroxybutyrate) depolymerase-like*	86743135	111224988	158313427, 158312582
	Poly(3-hydroxybutyrate) depolymerase-like*	86739947	111221400^†	158314094
	Poly(3-hydroxybutyrate) depolymerase-like*	86742257	111225134^†	158313019^†
	Putative esterase	86741433	111223634^†, 111224716^†	158313383, 158315460
	Secretory lipase*	86738753	111219534^‡, 111224342	158311883^†
Proteolytic	Metalloprotease-like protein	86741105	111223246^†	158315133
	Peptidase M16-like	86742474	111225385^†	158312786^†
	Peptidase M22, glycoprotease	86739340^†	111220592	158317749^†
	Peptidase M23B	86742263^†	111225140	158313012
	Peptidase S1 and S6, chymotrypsin/Hap	86738792	111219598	158318956^†
	Peptidase S1 and S6, chymotrypsin/Hap	86740691	111223367^‡	158318071
	Peptidase S8 and S53 subtilisin kexin sedolisin	86742624	111225604	158312643
	Peptidase S15	86742910^†	111224424^†	158315881
	Peptidase S16 lon domain protein	86742463	111225373	158312797
	Putative peptidase domain	86742587^†	111225562	158312677
Hypothetical	Alpha/beta hydrolase fold	86739338	111220590^†	158317752
	Alpha/beta hydrolase fold	86742456	111225365^†	158312806^†
	Alpha/beta hydrolase fold	86741553	111223803	158313859^†
	Hypothetical protein; putative glycosidase*	86742141	111222591	158317255
	Hypothetical protein; putative glycosidase*	86739771	111221236	158312651^†
	Hypothetical protein; putative lipase	86742918	111225845	158318206
	Hypothetical protein; putative GDSL lipase	86743055^†	111226008^‡	158312060
	Hypothetical protein; putative xylanase	86741387	111220334	158314619

	Gene present in two strains
Polysaccharolytic	Cellulase*	x	111224344^†, 111224345^†	158313493^†, 158318914
	Glycoside hydrolase, family 3, N-terminal	x	111220352	158317032
	Glucan endo-1,3-beta-D-glucosidase	x	111221161	158318718
Esterolytic/Lipolytic	Esterase	x	111221893	158313421^†
	Feruloyl esterase*	x	111221879	158315070
	Lipase class 2	86739361^†	x	158312565
	Putative carboxylesterase/lipase	x	111221691	158315258^†
	Putative lipase	x	111223894, 111223109	158314118^†
Proteolytic	Peptidase S8 and S53, subtilisin	x	111224419	158314198
	Putative protease	86741028	x	158315902

	Gene present in one strain
Polysaccharolytic	Arabinogalactan endo-1,4-beta-galactosidase	x	x	158314089
	Glycoside hydrolase, family 26	86741945	x	x
	Glycoside hydrolase, family 32	x	x	158318776
	Levanase	x	x	158318763
	Putative glycosidase	x	111223066	x
	Putative xylanase	x	111222228	x
Esterolytic/Lipolytic	Lipolytic enzyme, G-D-S-L	x	111222700	x
	Phospholipase A2	x	x	158315136
Hypothetical	Alpha/beta hydrolase fold	86741921	x	x

* Phylogenetic trees shown in Figure 3. For hypothetical glycosidases, Figure 3(E) shows addtional homologs not listed here. ^†Not predicted to contain a signal peptide by SignalP or TATFIND 1.4 ^‡Signal peptide predicted after manual inspection/re-annotation of start site region (see Methods)
Mastronunzio et al. BMC Genomics 2008 9:47 doi:10.1186/1471-2164-9-47