Table 7

Chemotaxis proteins in the P. zucineum genome
Locus P. zucineum
 5'-end
 3'-end
 Name
 Orthologs C. crescentus
 Operon
 Best BLAST match
PHZ_c0690
 753,270
 753,812
 chemotaxis protein CheW
 -
 1
 M. magneticum AMB-1
PHZ_c0691
 753,812
 755,218
 chemotaxis protein methyltransferase CheR
 -
 1
 M. magnetotacticum MS-1
PHZ_c0692
 755,240
 755,836
 chemotaxis signal transduction protein
 -
 1
 Rhodospirillum centenum
PHZ_c0693
 755,836
 757,488
 methyl-accepting chemotaxis protein
 -
 1
 M. magneticum AMB-1
PHZ_c0694
 757,501
 759,642
 chemotaxis histidine kinase CheA
 -
 1
 M. magnetotacticum MS-1
PHZ_c0695
 759,642
 760,709
 chemotaxis response regulator CheB
 -
 1
 Rhodospirillum centenum
PHZ_c3230
 3,661,514
 3,661,050
 CheE protein
 -
 2
 C. crescentus CB15
PHZ_c3231
 3,662,099
 3,661,527
 chemotaxis protein CheYIII
 CC0440
 2
 C. crescentus CB15
PHZ_c3233
 3,662,860
 3,662,477
 chemotaxis protein CheYII
 CC0591
 2
 R. palustris CGA009
PHZ_c3234
 3,663,186
 3,666,188
 chemotaxis histidine kinase CheA
 CC0594
 2
 Azospirillum brasilense
PHZ_c3235
 3,666,188
 3,666,733
 chemotaxis protein CheW
 CC0595
 2
 Rhodospirillum centenum
PHZ_c3236
 3,666,786
 3,669,191
 methyl-accepting chemotaxis protein McpH
 CC3349
 2
 R. palustris CGA009
PHZ_c3237
 3,670,166
 3,669,336
 chemotaxis protein methyltransferase CheR
 CC0598
 2
 R. palustris HaA2
PHZ_c3238
 3,671,242
 3,670,166
 chemotaxis response regulator CheB
 CC0597
 2
 M. magneticum AMB-1
PHZ_c3371
 3,820,121
 3,819,669
 CheE protein
 CC0441
 3
 C. crescentus CB15
PHZ_c3372
 3,820,729
 3,820,124
 chemotaxis protein CheYIII
 -
 3
 C. crescentus CB15
PHZ_c3373
 3,821,034
 3,820,729
 CheU protein
 CC0439
 3
 C. crescentus CB15
PHZ_c3374
 3,821,651
 3,821,082
 chemotaxis protein CheD
 CC0438
 3
 C. crescentus CB15
PHZ_c3375
 3,822,037
 3,821,651
 chemotaxis protein CheYII
 CC0437
 3
 C. crescentus CB15
PHZ_c3376
 3,823,068
 3,822,040
 chemotaxis response regulator CheB
 CC0436
 3
 C. crescentus CB15
PHZ_c3377
 3,823,955
 3,823,068
 chemotaxis protein methyltransferase CheR
 CC0435
 3
 A. cryptum JF-5
PHZ_c3378
 3,824,410
 3,823,946
 chemotaxis protein CheW
 CC0434
 3
 Rhizobium etli CFN 42
PHZ_c3379
 3,826,614
 3,824,422
 chemotaxis histidine kinase CheA
 CC0433
 3
 A. cryptum JF-5
PHZ_c3380
 3,826,997
 3,826,635
 chemotaxis protein CheYI
 CC0432
 3
 Caulobacter vibrioides
PHZ_c3381
 3,827,299
 3,826,997
 CheX protein
 CC0431
 3
 Sinorhizobium meliloti
PHZ_c3382
 3,829,234
 3,827,306
 methyl-accepting chemotaxis protein McpA
 CC0430
 3
 A. cryptum JF-5
PHZ_c0101
 94,220
 93,750
 CheE protein
 -
 scatted
 C. crescentus CB15
PHZ_c0102
 94,795
 94,220
 chemotaxis protein CheYIII
 -
 scatted
 C. crescentus CB15
PHZ_c0297
 292,469
 292,864
 chemotaxis protein CheYIV
 CC3471
 scatted
 C. crescentus CB15
PHZ_c0298
 292,867
 293,679
 chemotaxis protein methyltransferase CheR
 CC3472
 scatted
 C. crescentus CB15
PHZ_c0732
 803,383
 804,876
 methyl-accepting chemotaxis protein McpB
 CC0428
 scatted
 C. crescentus CB15
PHZ_c0961
 1,057,134
 1,058,720
 methyl-accepting chemotaxis protein McpI
 CC2847
 scatted
 R. palustris CGA009
PHZ_c1198
 1,380,883
 1,383,294
 methyl-accepting chemotaxis protein McpU
 -
 scatted
 A. cryptum JF-5
PHZ_c1199
 1,383,297
 1,383,758
 chemotaxis protein CheW1
 -
 scatted
 Sinorhizobium meliloti
PHZ_c1687
 1,890,274
 1,891,176
 chemotaxis MotB protein
 CC1573
 scatted
 C. crescentus CB15
PHZ_c1936
 2,169,634
 2,169,939
 chemotactic signal response protein CheL
 CC2583
 scatted
 C. crescentus CB15
PHZ_c2211
 2,499,744
 2,499,274
 chemotaxis protein CheYIII
 -
 scatted
 O. alexandrii HTCC2633
PHZ_c2392
 2,720,611
 2,720,144
 chemotaxis protein CheYIII
 -
 scatted
 C. crescentus CB15
PHZ_c2741
 3,142,750
 3,143,238
 chemotaxis protein CheYIII
 CC3155
 scatted
 C. crescentus CB15
PHZ_c3123
 3,549,150
 3,550,016
 chemotaxis MotA protein
 CC0750
 scatted
 C. crescentus CB15
PHZ_c3401
 3,848,811
 3,850,766
 methyl-accepting chemotaxis protein McpA
 -
 scatted
 C. vibrioides

Luo et al. BMC Genomics 2008 9:386   doi:10.1186/1471-2164-9-386