Figure 2.

Correlation with clinical AML data. A. Published microarray data on 285 AML patients [23] were ordered using Gene Recommender according to the expression pattern of the 11 probe sets for RUNX1. The patients with t(8;21) are marked in orange and those with inv(16) in red. Probes co-regulated with RUNX1 are highly ranked (yellow bar), whereas probes showing an expression pattern the least similar to RUNX1 are ranked lowest (blue bar). B-C. Random permutations were performed to compare the rank of the genes differentially expressed in FPD platform and random set of genes. The histograms show the percentage of up- or down-regulated genes in FPD relative to their rank with "0" being the probes co-regulated with RUNX1 (yellow) and "1" being the probes the least similar to RUNX1 (blue). The trends observed in the histograms are represented as triangles or rectangle. D-E. Similar histograms showing percentage of up- or down-regulated genes in CBF relative to their rank.

Michaud et al. BMC Genomics 2008 9:363   doi:10.1186/1471-2164-9-363
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