Table 4

Validation analysis.

Sample

Preliminary Results

Simultaneous

Conditional

Epistatic


Original

418,535

19,630

6,706

35

Validation 1

396,708

20,855

6,897

23

Validation 2

283,584

19,270

6,219

18

Validation 3

299,846

19,261

6,000

27

Validation 4

403,475

19,640

6,660

21

Validation 5

337,422

19,575

6,463

22

Validation 6

320,406

18,879

6,230

20

Validation 7

313,653

18,667

5,943

21

Validation 8

294,007

19,255

6,360

26

Validation 9

322,754

18,478

5,772

22

Validation 10

363,194

19,317

5,529

28

Average Count (St. Dev.)

341,235 (47,125)

19,348 (629)

6,253 (419)

24 (5)

Average %

100%

7.92%

2.56%

0.010%


Number of total preliminary results, and number of selected simultaneous, conditional and epistatic two-locus combinations in the original sample, and in ten random-placement validation samples. Average numbers (and standard deviations) for the 11 samples, and average percentage of each category, are included.

Gay├ín et al. BMC Genomics 2008 9:360   doi:10.1186/1471-2164-9-360

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