Table 2

Direct hypothesis category of yeast genes shown by microarray analysis to be affected by berenil treatment

ORF
Gene
Ratio
Function
Process

YBR233W-A
DAD3
-3.45
mitosis
protein binding activity
Q0130
OLI1
-2.75
ATP synthase activity
ATP synthesis coupled proton transport
YDR070C
FMP16
-2.43
unknown
unknown
YEL039C
CYC7
-2.41
electron transport
electron carrier activity
YLR327C
TMA10
-2.35
unknown
unknown
YJL156W-A
YJL156W-A
-2.25
unknown
unknown
YMR105C
PGM2
-2.23
glucose 1-phosphate utilization
phosphoglucomutase activity
YGR248W
SOL4
-2.00
unknown
unknown
YHR087W
YHR087W
-1.95
unknown
unknown
YPR160W
GPH1
-1.76
glycogen catabolism
glycogen phosphorylase activity
YLR178C
TFS1
-1.76
regulation of proteolysis
lipid binding activity
YOR173W
DCS2
-1.72
unknown
unknown
YEL011W
GLC3
-1.66
glycogen metabolism
1,4-alpha-glucan branching enzyme activity
YMR081C
ISF1
-1.64
aerobic respiration
unknown
YER150W
SPI1
-1.51
unknown
unknown
YER067W
YER067W
-1.50
unknown
unknown
YOR031W
CRS5
-1.45
response to metal ion
copper ion binding activity
YIL136W
OM45
-1.43
unknown
unknown
YPL230W
YPL230W
-1.41
unknown
unknown
YOR178C
GAC1
-1.38
meiosis
protein phosphatase type 1 activity
YFR053C
HXK1
-1.35
fructose metabolism
hexokinase activity
YOR120W
GCY1
-1.33
salinity response
aldo-keto reductase activity
YFR017C
YFR017C
-1.32
unknown
unknown
YOR374W
ALD4
-1.31
ethanol metabolism
aldehyde dehydrogenase (NAD+) activity
YJR096W
YJR096W
-1.29
arabinose metabolism
oxidoreductase activity
YFR015C
GSY1
-1.27
glycogen metabolism
glycogen (starch) synthase activity
YDR453C
TSA2
-1.22
regulation of redox homeostasis
thioredoxin peroxidase activity
YHL021C
FMP12
-1.21
unknown
unknown
YKL151C
YKL151C
-1.15
unknown
unknown
YGR008C
STF2
-1.14
ATP synthesis
unknown
YDL130W-A
STF1
-1.09
ATP synthesis
unknown
YCL042W
YCL042W
-1.08
unknown
unknown
YOR385W
YOR385W
-1.07
unknown
unknown
YIL045W
PIG2
-1.07
unknown
protein phosphatase regulator activity
YLR258W
GSY2
-1.06
glycogen metabolism
glycogen (starch) synthase activity
YMR173W
DDR48
-1.04
DNA repair
unknown
YNL015W
PBI2
-1.03
vacuole fusion (non-autophagic)
endopeptidase inhibitor activity
YCL040W
GLK1
-1.02
carbohydrate metabolism
glucokinase activity
YAR071W
PHO11
1.02
phosphate metabolism
acid phosphatase activity
YKL099C
UTP11
1.18
processing of 20S pre-rRNA
snoRNA binding activity

Genes hypothesized to be directly affected by berenil treatment are listed with their expression ratios (log2 transformed treated to untreated) and functions, if known.

Eckdahl et al. BMC Genomics 2008 9:32   doi:10.1186/1471-2164-9-32