Additional file 7.

Alignment results obtained with NeedlN and WaterN programs, available through EBI SRS server, compared with BLAT scores. Table shows results for each NumtS from both Needleman and Wunsch and Waterman and Smith algorithms for global and local alignments. Results of alignments are compared with BLAT scores. Each NumtS is identified by a numeric code in NumtS Code column. Columns list % similarity, % gaps, score, alignment length and ratio obtained by application of alignment programs. BLAT scores for each NumtS Code are shown in last column.

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Lascaro et al. BMC Genomics 2008 9:267   doi:10.1186/1471-2164-9-267