Research article
Prediction and analysis of nucleosome exclusion regions in the human genome
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* Corresponding author: Sawsan Khuri skhuri@med.miami.edu
1 Department of Electrical and Computer Engineering, University of Miami College of Engineering, Coral Gables, FL 33124, USA
2 Department of Biology, University of Miami, Coral Gables, FL 33124, USA
3 Center for Computational Science, and the Dr. John T. Macdonald Foundation Department of Human Genetics and Genomic Medicine, University of Miami Miller School of Medicine, Miami, FL 33136 USA
BMC Genomics 2008, 9:186 doi:10.1186/1471-2164-9-186
Published: 22 April 2008Additional files
Additional file 1:
NXScore profiles for all 23 chromosomes and the mitochondrial chromosome.
Format: PDF Size: 309KB Download file
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Additional file 2:
Graphs of additional groupings for Figure 3.
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Additional file 3:
Graphs of additional genes for Figure 6.
Format: PDF Size: 144KB Download file
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Additional file 4:
Genes used and their tissue specificity. An SQL file containing the 19055 genes used in this study and their tissue specificity level according to Shannon's entropy.
Format: SQL Size: 626KB Download file
Additional file 5:
Nucleosome exclusion regions in GFF format. A zip file containing the whole annotations for human genome nucleosome exclusion regions in gff format, a single *.gff file for each chromosome.
Format: ZIP Size: 12.1MB Download file
Additional file 6:
Nucleosome exclusion scores in wiggle format. A zip file containing the whole annotations for human genome nucleosome exclusion scores in wiggle format, a single *.wig file for each chromosome.
Format: ZIP Size: 14.2MB Download file