Table 2

Known gene derived small RNAs

subclass of known gene derived small RNA

The most abundant clusters


Relative Location to the gene

Orientation

# of RNA

# of clusters

ID

sequences

Locatin

gene

major length


Intron

sens

664

340

srclusterR414

183 (28%)

chr3:130614020..130614043

C3orf25

21 nt

Intron

antisense

1163

441

srclusterR1388

636 (55%)

chrX:12299549..12299573

FRMPD4

23 nt,22 nt

3'UTR

antisense

84

22

srclusterF378

68 (81%)

chr11:777438..777463

CEND1

24 nt


Kawaji et al. BMC Genomics 2008 9:157   doi:10.1186/1471-2164-9-157

Open Data