Table 4

Mycobacterial isolates used in this study.

SSR Type

Isolate

Organisma

Host

G-rep

GGT-rep

IS1311 type

hsp65 PstI digest

Mycobactin J dependency

Source

Genomotypeb


7926

MAP

Armadillo

7

4

cattle

undigested

YES

UMNc

Cattle

7288

MAP

Bison

7

5

bison

undigested

YES

UMN

Cattle

7297

MAP

Bison

7

4

bison

undigested

YES

UMN

Cattle

7560

MAP

Bison

7

4

bison

undigested

YES

UMN

Cattle

7876

MAP

Cat

14

5

cattle

undigested

YES

UMN

Cattle

1018

MAP

Cattle

7

4

cattle

undigested

YES

UMN

Cattle

6052

MAP

Cattle

YES

UMN

Cattle

6054

MAP

Cattle

YES

UMN

Cattle

6057

MAP

Cattle

YES

UMN

Cattle

7265

MAP

Cattle

10

5

cattle

undigested

YES

ATCC 19815

Hominissuis

7301

MAP

Cattle

11

5

cattle

undigested

YES

UMN

Hominissuis

7935

MAP

Cattle

14

5

cattle

undigested

YES

UMN

Cattle

4026

MAP

Goat

10

5

cattle

undigested

YES

UMN

Cattle

4054

MAP

Goat

7

5

cattle

undigested

YES

UMN

Cattle

4137

MAP

Goat

12

5

cattle

undigested

YES

UMN

Cattle

7896

MAP

Human

cattle

undigested

YES

ATCC 43545

Cattle

BEN

MAP

Human

7

4

cattle

undigested

YES

ATCC 43544

Cattle

HOLLAND

MAP

Human

7

4

cattle

undigested

YES

ATCC 49164

Cattle

LINDA

MAP

Human

7

5

cattle

undigested

YES

ATCC 43015

Cattle

MAH104

MAH

Human

avium

NO

NADCd

Hominissuis

MAP3

MAP

Human

7

5

cattle

undigested

UMN

Cattle

MAP4

MAP

Human

7

4

cattle

undigested

YES

UMN

Cattle

MAP5

MAP

Human

7

5

cattle

undigested

UMN

Cattle

MAP6

MAP

Human

7

5

cattle

undigested

YES

UMN

Cattle

MAP7

MAP

Human

7

5

cattle

undigested

UMN

Cattle

397

MAP

Sheep

sheep

YES

NADC

Sheep

467

MAP

Sheep

sheep

YES

NADC

Sheep

5001

MAP

Sheep

2GC4G

3

sheep

digested

YES

UMN

Avium-silvaticum

7565

MAP

Sheep

15

3

sheep

undigested

YES

UMN

Sheep

9034

MAP

Sheep

sheep

undigested

UMN

Hominissuis

9040

MAP

Sheep

sheep

undigested

UMN

Sheep

7887

MAP

Starling

15

5

cattle

undigested

YES

UMN

Cattle

7889

MAP

Starling

7

5

cattle

undigested

YES

UMN

Cattle

7890

MAP

Starling

13

5

cattle

undigested

YES

UMN

Cattle

7893

MAP

Starling

12

5

cattle

undigested

YES

UMN

Cattle

6071

MAA

Strain 18

NO

NADC

Avium-silvaticum

8744

MAA

Strain 18

2GC4G

3

UMN

Avium-silvaticum

8743A

MAA

Strain 18

2GC4G

3

UMN

Avium-silvaticum

8744A

MAA

Strain 18

2GC4G

3

UMN

Avium-silvaticum

6006

MAS

Pigeon

avium

NO

NADC

Avium-silvaticum

6007

MAS

Pigeon

NO

NADC

Avium-silvaticum

6049

MAS

Pigeon

NO

NADC

Avium-silvaticum

6058

MAS

Pigeon

avium

NO

NADC

Avium-silvaticum

ATCC49884

MAS

Pigeon

NO

ATCC 49884

Avium-silvaticum

ATCC25291

MAA

Chicken

NO

ATCC 25291

Avium-silvaticum

ATCC35719

MAA

Chicken

NO

ATCC 35719

Avium-silvaticum

5835cc

MAA

Duck

NADC

Hominissuis

5836cc

MAA

Duck

NADC

Hominissuis


a Classification upon initial isolation.

b Genomotype is based upon the microarray hybridization profile.

c University of Minnesota – laboratory of Dr. Srinand Sreevatsan.

d National Animal Disease Center – laboratory of Dr. Michael Paustian

Paustian et al. BMC Genomics 2008 9:135   doi:10.1186/1471-2164-9-135

Open Data