Table 2

ESTIMA:Songbird Build 2, presence ("yes") or absence ("no") of specific sequences of interest assessed by direct BLAST with available avian or mammalian sequences against 58,211 sequences in the ESTIMA database as of June 2005.

    Yes

    No

    Yes

    No

    Yes

    No


    Steroid Receptors

    Extracellular Signaling

    GABA transmission


Androgen Receptor

BDNF

GABA-A alpha 1

estrogen receptor alpha

cannabinoid receptor

GABA-A alpha 2

estrogen receptor beta

IGF-2

GABA-A alpha 4

estrogen receptor gamma

N-CAM

GABA-A alpha 5

RARalpha

GABA-A beta 3

RARbeta

    Intracellular signaling

GABA-A delta

RARgamma

Calbindin

GABA-A gamma 2

RXRalpha

CAMKII

GABA-A gamma 3/4

RXRbeta

Canarygranin

GABA-B

RXRgamma

CRABPI

GABA-C rho-2B

    Steroid Metabolism

CRABPII

GAD-65

Aromatase

CRBPI

GAD67

P450-CYP26

CRBPII

    Potassium channels

zRalDH

GAP-43

Kcnma1

    Immediate Early Genes

MAPKK

Kcnmb1

ARC

Narp

Kcnmb2

c-fos

parvalbumin

Kcnmb3

c-jun

PAX-6

Kcnmb4

zenk

SNAP-25

Kv3.1

    Cytoskeleton

Synapsin I

    Transporters

Beta Tubulin

synapsin IIb

VGAT

GFAP

VGLUT

NFM

VIAAT

vimentin


Replogle et al. BMC Genomics 2008 9:131   doi:10.1186/1471-2164-9-131

Open Data