Methodology article

De novo identification of LTR retrotransposons in eukaryotic genomes

Mina Rho¹, Jeong-Hyeon Choi², Sun Kim^2,³, Michael Lynch⁴ and Haixu Tang^2,³^*

¹ Department of Computer Science, Indiana University, Bloomington, IN 47405, USA

² Center for Genomics and Bioinformatics, Indiana University, Bloomington, IN 47405, USA

³ School of Informatics, Indiana University, Bloomington, IN 47408, USA

⁴ Department of Biology, Indiana University, Bloomington, IN 47405, USA

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BMC Genomics 2007, 8:90 doi:10.1186/1471-2164-8-90

Published: 3 April 2007

Additional File 1:

List of LTR retroelements in the C. briggsae genome.

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Additional File 2:

List of LTR retroelements in the D. pseudoobscura genome.

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Additional File 3:

Distribution of LTR retroelements in the C. elegans genome. The coordinates of elements are plotted with respect to their chromosomal locations.

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