Table 1

ABC systems present in B. pseudomallei and absent in B. mallei

Family/Subfamilya

Allocrite/Function

B. pseudomallei K96243

B. mallei ATCC 23344

No. of similar systems functioning


DPL/HLY

Haemolysin

BPSL1660/1664/1665

System absent

2

DPL/HMT

Fe/S cluster precursor

BPSL1797

System absent

2

DPL/SID

Pyochelin

BPSS0589b/0590

System absent

0

DRI/YHIH

Unknown

BPSS1937/1938/1939

Pseudogene

0

HAA

Branched-chain amino acids

BPSS0575/0576/0577/0578/0579/0802

Components absent

5

ISB

Unknown

BPSL2369/2370/2371

Pseudogene

0

ISVH

Fe(III)-pyochelin

BPSS0591/BPSL1781/1783/1784

Component absent

0

ISVH

Haemin

BPSL2721/2722/2723/2724

Pseudogene

1

MOI

Iron (III)

BPSS0702/0703/0704

Pseudogene

2

MOI

Polyamines

BPSL1649/1650/1651/1652 (on genomic island)

System absent

2

MOI

Polyamines

BPSS0075/0076/0077

System absent

2

MOI

Polyamines

BPSS0464/0465/0466/0467

System absent

2

MOS

Monosaccharide

BPSS0140/0141/0142

System absent

2

MOS

Monosaccharide

BPSS1030/1031/1032/1033

Components absent

2

MOS

Monosaccharide

BPSS2069/2070/2071 (on genomic island)

System absent

2

MOS

Ribose

BPSL1832/1833/1834

System absent

1

MOS

Ribose

BPSS0255/0256/0257

Pseudogene

1

o228

Unknown

BPSS0623/0624/0625

System absent

4

OSP

Oligosaccharide or polyol

BPSS2082/2083/2084/2085 (on genomic island)

System absent

1

OTCN

Aliphatic sulphonates

BPSL1822/1823/1824

System absent

2

OTCN

Nitrate

BPSL0712/0713

System absent

1

OTCN

Taurine

BPSS1572/1573/1574

Pseudogene

0

PAO

Polar amino acid

BPSL1807/1808/1809

System absent

0

PHN

Alkylphosphonate

BPSL2848/2849/2850

Pseudogene

0


a Families and subfamilies as described at the ABSCISSE database [34]; b [27]

Harland et al. BMC Genomics 2007 8:83   doi:10.1186/1471-2164-8-83

Open Data