Table 6

Amino acid sites under positive selection

Model

Number of Parameters

Parameter Estimates a

ω

Sites under positive selection


M1a

2

þ0 = 0.114

ω0 = 0.185

0.9067

M2a

4

þ0 = 0.031

þ1 = 0.771

ω0 = 0

ω2 = 3.881

1.541

80, 118, 182, 198, 214 & 233

M7

2

þ = 0.166 q = 0.012

0.916

M8

4

þ0 = 0.793

þ = 0.171

q = 0.011

ωs = 3.612

1.478

80, 118, 182, 198, 214 & 233


a [44, 49, 50]

Wheeler et al. BMC Genomics 2007 8:75   doi:10.1186/1471-2164-8-75

Open Data