Table 3

Percentage of LOH determined for copy neutral, copy gain and copy loss events.

% LOH


Copy neutral

Gain

Loss

Cell line

SNP (%)

CGH (%)

SNP (%)

CGH (%)

SNP (%)

CGH (%)


CSCC1

25.7

30.4

43.9

41.8

30.3

27.7

CSCC7

17.5

19.8

12.8

14.1

69.6

66.0

CC8

79.1

78.5

19.0

15.3

1.7

6.2

CC10A

62.7

77.6

5.9

7.9

31.3

14.4

CC10B

52.3

59.6

12.5

14.2

35.2

26.2

CC11-

80.1

80.7

14.7

14.9

5.2

4.4

CC11+

83.6

86.1

5.5

5.5

10.9

8.4

CasKi

53.4

60.0

20.5

26.6

26.0

13.7

SiHa

54.6

54.2

8.1

11.5

34.3

37.3

HeLa

63.3

74.1

25.8

16.6

10.9

9.4


Average

57.2

62.1

16.9

16.8

25.5

21.4


Kloth et al. BMC Genomics 2007 8:53   doi:10.1186/1471-2164-8-53

Open Data