Table 1

Differentially expressed genes in male and female D. pulex

Mature Enriched vs. Male

Mature Depleted vs. Male

Juvenile Enriched vs. Male

Juvenile Depleted vs. Male

Self vs. Self

Male enriched vs. Female

Female Enriched vs. Male

Mature enriched vs. Juvenile

Juvenile enriched vs. Mature


Total Significant*

775

1183

732

1151

0

1445

757

591

773

Sequenced

465

554

391

514

-

590

432

259

629

Assembled

201

321

191

349

-

391

179

159

196

Estimated Non-redundant Genes

335 (21%)

685 (44%)

357 (23%)

781 (50%)

-

957 (61%)

313 (20%)

363 (23%)

241 (15%)

Two-fold Difference

247

431

362

13

0

738

617

23

388

Sequenced

198

234

136

9

-

361

385

11

249

Assembled

91

128

136

7

-

211

167

8

122

Estimated Non-redundant Genes

113 (7.2%)

235 (15%)

216 (14%)

10 (0.6%)

-

431 (28%)

267 (17%)

19 (1.2%)

190 (12%)


All differentially expressed array elements and assembled genes in male-female comparisons and at a two-fold difference. Comparisons include male vs. mature female, male vs. juvenile female, males vs. females (combined), mature vs. juvenile females, and self vs. self. *Total numbers of significant elements at 5% false discovery rate. † For each category (column), estimated non-redundant genes are calculated as proportion: assembled sequences/sequenced elements multiplied by total number significant. Percentages are calculated relative to the estimate of 1,560 unique genes on the array.

Eads et al. BMC Genomics 2007 8:464   doi:10.1186/1471-2164-8-464

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