Table 1

Distribution of HKs and RRs found in the genomes of P. syringae pv. syringae B728a, pv. tomato DC3000 and pv. phaseolicola 1448A.

HK type/RR type

P. syringae pv. syringae B728a

P. syringae pv. tomato DC3000

P. syringae pv. phaseolicola 1448A


Histidine kinases

Type IA

22

20

21

Type IB

13

15

15

Type IC

20

21

22

Type III

2

2

2

CheA-like

4

4

4

GAF-HK

6

6

5

LytS-like

1

1

1

Total HKs

68

69

70

Response regulators

Stand-alone REC

12

13

10

OmpR-like

22

20

19

NarL-like

9

12

10

NtrC-like

11

11

11

LytR-like

2

2

2

PrrA-like

1

1

1

PleD-like

5

4

5

RsbU-like

2

2

2

CheB-like

3

3

3

CheC-like

1

1

1

CheW-like

2

2

2

VieA-like

1

1

1

VieB-like

1

1

1

AmiR-like

1

--

--

REC-HK (hybrid HK)

20

22

24

Total RRs

93

95

92


LavĂ­n et al. BMC Genomics 2007 8:397   doi:10.1186/1471-2164-8-397

Open Data