|
Sequence characteristics of clones matching previously identified ESTs |
||||||
| Clone |
Accession |
Length (bp) |
ORF (%)* |
Degree of Conservation |
Spliced |
polyA |
|
|
||||||
| 11_C08 |
EC093853 |
470 |
19.6 |
+† |
no |
no |
| 13_F07 |
EC093910 |
281 |
44.5 |
+ |
no |
yes |
| 13_G08 |
EC093913 |
126 |
75.4 |
+ |
no |
no |
| 14_D02 |
EC093923 |
671 |
27.6 |
+ |
no |
no |
| 14_G04 |
EC093933 |
521 |
42.4 |
+ |
no |
no |
| 1a_B02 |
EC093936 |
579 |
25.7 |
+ |
no |
no |
| 1a_D01 |
EC093941 |
451 |
20.4 |
++ |
no |
no |
| 1a_F05 |
EC093946 |
478 |
19.9 |
+++++ |
no |
yes |
| 1a_H09 |
EC093956 |
683 |
33.7 |
+ |
no |
no |
| 1b_A09 |
EC093959 |
619 |
30.4 |
++ |
no |
no |
| 1b_A11 |
EC093961 |
284 |
63.0 |
+ |
no |
yes |
| 1b_C01 |
EC093963 |
584 |
27.9 |
+ |
no |
no |
| 1c_A02 |
EC093968 |
514 |
25.5 |
++ |
no |
yes |
| 1c_D12 |
EC093979 |
215 |
59.5 |
+++++ |
no |
no |
| 1c_E05 |
EC093980 |
429 |
49.4 |
+ |
yes |
yes |
| 1c_G06 |
EC093989 |
525 |
26.1 |
+ |
no |
no |
| 1d_C12 |
EC094007 |
596 |
22.0 |
++ |
no |
yes |
| 1d_G02 |
EC094018 |
351 |
36.5 |
+++++ |
no |
no |
| 2c_B04 |
EC094028 |
484 |
21.5 |
+ |
no |
yes |
| 2c_B10 |
EC094032 |
427 |
44.0 |
+ |
no |
no |
| 2c_D10 |
EC094037 |
487 |
37.0 |
+ |
no |
no |
| 2c_F04 |
EC094043 |
384 |
45.8 |
+ |
no |
yes |
| 2c_H03 |
EC094044 |
642 |
48.0 |
+ |
no |
no |
| 2d_B10 |
EC094049 |
299 |
54.8 |
+++ |
no |
no |
| 2d_D07 |
EC094054 |
299 |
60.5 |
+ |
no |
no |
|
* Length of longest open reading frame as a percentage of the total length of each clone. † Degree of conservation of each clone: + = 0–9%; ++ = 10–29%; +++ = 30–59%; ++++ = 60–79%; and +++++ = 80–100% conservation. | ||||||
Quayle et al. BMC Genomics 2007 8:32 doi:10.1186/1471-2164-8-32 |
||||||