Research article
Detection of RNA structures in porcine EST data and related mammals
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* Corresponding author: Jan Gorodkin gorodkin@genome.ku.dk
1 Division of Genetics and Bioinformatics, IBHV, University of Copenhagen, Grønnegårdsvej 3, DK-1870 Frederiksberg, Denmark
2 Bioinformatics Group, Department of Computer Science, University of Leipzig, Germany
3 The Wellcome Trust/Cancer Research UK Gurdon Institute, Cambridge, CB2 1QN, UK
4 Institute for Theoretical Chemistry and Structural Biology, University of Vienna, Austria
BMC Genomics 2007, 8:316 doi:10.1186/1471-2164-8-316
Published: 10 September 2007Additional files
Additional file 1:
Supplementary tables and figures. (A) Comparison of different blastn parameter allocations in the PigEST-cow alignments and (B) additional tables and figures reporting further results of the pipeline.
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Additional file 2:
Widely expressed ncRNA candidates. A list of ncRNA candidates expressed in at least 10 cDNA libraries with at least two EST reads in each.
Format: CSV Size: 3KB Download file