Table 3

bldA-dependent genes for which some direct link to bldA can be proposed

Gene1

Gene product2

Reference


    A: Containing a TTA codon

SCO4262

Hypothetical protein

[55]

SCO6638

Hypothetical protein

[55]

    B: Regulated by a TTA-containing gene

    By adpA

SCO0762

Protease inhibitor

[55]

    By SCO4263

SCO4246

Hypothetical protein

[55]

SCO4251

Putative secreted protein

This study

SCO4252

Hypothetical protein

This study

SCO4253

Conserved hypothetical protein

This study

    By act II-ORF4

SCO5071

Hydroxylacyl-CoA dehydrogenase, ActVI-ORFA

[14]

SCO5073

Putative oxidoreductase, ActVI-ORF2

[14]

SCO5074

Putative dehydratase, ActVI-ORF3

[14]

SCO5075

Putative oxidoreductase, ActVI-ORF4

[14]

SCO5078

Hypothetical protein

[14]

SCO5079

Conserved hypothetical protein

[14]

SCO5086

Ketoacyl reductase, ActIII

[14]

SCO5088

Polyketide beta-ketoacyl synthase, ActI-ORF2

[14]

SCO5090

Actinorhodin polyketide cyclase/dehdratase, ActVII

[14]

    By redZ

SCO5895

Putative methyltransferase, RedI

[20]

    C: In a putative operon with a TTA-containing gene

SCO0392

Putative methyltransferase

[31]

SCO0395

Putative epimerase/dehydratase

[31]

SCO0400

Putative epimerase

[31]

SCO0401

Putative aminotransferase

[31]

SCO0991

Conserved hypothetical protein

[31]

SCO0994

Integral membrane protein

[31]

SCO0995

Probable methyltransferase

[31]

SCO6637

Hypothetical protein

[31]


1the combined list of 147 bldA-affected genes as determined by transcriptomics and/or proteomics was considered

2from SCODB [55]

Hesketh et al. BMC Genomics 2007 8:261   doi:10.1186/1471-2164-8-261

Open Data