Table 3 |
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|
Introns in Leptosira cpDNA and homologous introns at identical gene locations in other chlorophyte cpDNAs |
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|
Leptosira intron |
Homologous introns |
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|
|
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|
Designation |
Subgroup a |
ORF location b |
Green alga c/Intron number d |
Accession no. |
|
|
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|
Lt.trnL(uaa) |
IC3 |
- |
Bryopsis plumosa (U) |
GenBank:M61159 |
|
Chlorella vulgaris (T) |
GenBank:NC_001865 |
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|
Scenedesmus obliquus (C) |
GenBank:M90641 |
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|
Lt.chlL |
IA1 |
- |
Chlorella vulgaris (T) |
GenBank:NC_001865 |
|
Lt.psaB |
IA1 |
- |
Chlamydomonas moewusii (C) |
GenBank:M90641 |
|
Scenedesmus obliquus (C) |
GenBank:M90641 |
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|
Stigeoclonium helveticum i2 (C) |
Genbank:DQ630521 |
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|
Lt.psbC |
IA1 |
L9.3 |
- |
- |
|
|
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|
a Group I introns were classified according to Michel and Westhof [48]. b L followed by a number refers to the loop extending the base-paired region identified by the number. c The letter in parentheses denotes the chlorophyte lineage comprising the green alga indicated: U, Ulvophyceae; T, Trebouxiophyceae; C, Chlorophyceae. d The intron number is given when more than one intron is present. |
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|
de Cambiaire et al. BMC Genomics 2007 8:213 doi:10.1186/1471-2164-8-213 |
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