Table 6

Cytokine transcripts enriched in vehicle-treated chondrocytes. I.

HUGO gene symbol

Rank

RMS

RES


Cklfsf2b

16971

-0.0424

-0.574

Il7

16981

-0.0425

-0.569

Il1f9

17007

-0.0427

-0.566

Grn

17130

-0.0439

-0.567

Il1f6

17153

-0.0442

-0.563

Ifna2

17418

-0.0468

-0.571

Tslp

17503

-0.0477

-0.570

Il17

17568

-0.0483

-0.568

A730028g07rik

17606

-0.0486

-0.564

Cxcl11

17634

-0.0490

-0.560

Ctf1

17857

-0.0519

-0.565

Lta

17864

-0.0519

-0.559

Il1a

18018

-0.0539

-0.561

Ccl20

18038

-0.0542

-0.556

Ccl17

18334

-0.0584

-0.564

Ccl12

18384

-0.0592

-0.560

Cklf

18618

-0.0639

-0.564

Ifna11

18855

-0.0688

-0.568

Cklfsf6

18874

-0.0693

-0.561

Il15

18955

-0.0719

-0.557

Ltb

19146

-0.0779

-0.558

Ccl3

19220

-0.0814

-0.552

Tnfsf9

19228

-0.0816

-0.543

Cx3cl1

19523

-0.0975

-0.547

Gdf15

19660

-0.1100

-0.541

Bmp5

19775

-0.1238

-0.533

Cxcl14

19798

-0.1289

-0.519

Cxcl1

19928

-0.1698

-0.507

Cxcl10

19951

-0.1807

-0.487

Ccl7

19956

-0.1849

-0.466

Gdf5

19973

-0.2066

-0.444

Cxcl12

19978

-0.2104

-0.420

Areg

19983

-0.2189

-0.395

Cxcl2

19996

-0.2421

-0.369

Ppbp

20014

-0.2944

-0.336

Lif

20024

-0.3296

-0.299

Ccl2

20030

-0.3589

-0.258

Il11

20035

-0.4036

-0.213

Cxcl5

20039

-0.5406

-0.152

Tnfsf11

20041

-0.5835

-0.085

Il6

20043

-0.7529


Rank = position of genes in the context of the ranked list of array genes

RMS = the ranked metric score

RES = the running enrichment score

James et al. BMC Genomics 2007 8:205   doi:10.1186/1471-2164-8-205

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