Table 1 |
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|
Bacterial species/strains whose partial and/or complete genome sequence was downloaded from various sources |
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|
Organism |
References |
Closed-Curated annotation |
Genbank |
Coordinates (length) |
Flank One |
Flank Two |
% genome AT content |
% ori AT content |
|
|
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|
Wolbachia pipientis wMel_A |
[15] |
Y |
988364..988765 (402 bp) |
WD_1027/COG1253 (CBS) |
WD_1028/hemE |
64.77 |
75.87 |
|
|
Wolbachia pipientis wBm_D |
[14] |
Y |
1079740..110 (455 bp) |
Wbm_0809/COG1253 (CBS) |
Wbm_0001/hemE |
65.82 |
69.89 |
|
|
Wolbachia pipientis wAna_A |
[43] |
N |
N/A (402 bp) |
WwAna0355/COG1253 (CBS) |
WwAna0353/hemE |
N/A |
75.87 |
|
|
Wolbachia pipientis wSim_A |
[43] |
N |
N/A (396 bp) |
WwSim0491/COG1253 (CBS) |
WwSim0492/hemE |
N/A |
75.51 |
|
|
Wolbachia pipientis wWil_A |
[44] |
N |
N/A |
N/A (402 bp) |
COG1253 (CBS) |
hemE |
N/A |
75.49 |
|
Wolbachia pipientis wPip_B |
[45] |
N |
N/A |
N/A (402 bp) |
COG1253 (CBS) |
hemE |
N/A |
79.17 |
|
Ehrlichia chaffeensis Arkansas |
[36] |
Y |
26939..27361 (423 bp) |
ECH_0030/hemE |
ECH_0031/COG1253 |
69.90 |
74.70 |
|
|
Ehrlichia ruminantium Welgevonden |
[35] |
Y |
23003..23424 (422 bp) |
Erum_0180/hemE |
Erum_0190/COG1253 |
72.52 |
75.19 |
|
|
Ehrlichia ruminantium Gardel |
[88] |
Y |
4149..4564 (416 bp) |
ERGA_CDS_00050/hemE |
ERGA_CDS_00060/COG1253 |
72.49 |
75.48 |
|
|
Ehrlichia canis Jake |
NC_007354 |
Y |
11395..11819 (425 bp) |
Ecaj_0010/hemE |
Ecaj_0011/COG1253 |
71.04 |
73.88 |
|
|
Anaplasma marginale St. Maries |
[34] |
Y |
1147944..1148563 (620 bp) |
AM_1301/hemE |
AM_1303/COG1253 |
50.24 |
63.71 |
|
|
Anaplasma phagocytophilum HZ |
[36] |
Y |
20557..20941 (385 bp) |
APH_0020/hemE |
APH_0021/COG1253 |
58.36 |
71.43 |
|
|
Neorickettsia sennetsu Miyayama |
[36] |
Y |
855136..855541 (406 bp) |
NSE_0967/phage uncharacterized protein |
NSE_0968/hemE |
58.92 |
71.92 |
|
|
[36] |
Y |
267777..268329 (553 bp) |
NSE_0324/hypothetical protein |
NSE_0327/COG1253 |
58.92 |
58.22 |
||
|
Rickettsia typhi Wilmington |
[75] |
Y |
1111114..1111496 (383 bp) |
RT_0877/hemE |
RT_0001/COG1806 |
71.08 |
82.25 |
|
|
Rickettsia prowazekii Madrid E |
[73] |
Y |
1111140..1111523 (384 bp) |
RP_885/hemE |
RP_001/COG1806 |
71.00 |
82.55 |
|
|
Rickettsia conorii Malish 7 |
[74] |
Y |
1268361..1268755 (395 bp) |
RC_1374/hemE |
RC_0001/COG1806 |
67.56 |
81.52 |
|
|
Rickettsia felis URRWXCal2 |
[76] |
Y |
1484753..1485148 (396 bp) |
RF_1400/hemE |
RF_0001/COG1806 |
67.55 |
82.83 |
|
|
Caulobacter crescentus CB15 |
[89] |
Y |
4016703..159 (404 bp) |
CC_3763/hemE |
CC_0001/COG1806 |
32.80 |
43.56 |
|
|
|
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|
Y, yes; N, no; N/A, not applicable. |
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|
Ioannidis et al. BMC Genomics 2007 8:182 doi:10.1186/1471-2164-8-182 |
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