Table 1

Genomic locations of miRNAs in the 8 differentially expressed groups.

Ch

Start

End

Strand

p value*


Group I

hsa-mir-133b

6

52121680

52121798

+

hsa-mir-133a-1

18

17659657

17659744

-

hsa-mir-1-2

18

17662963

17663047

-

1.77 × 10-13

hsa-mir-1-1

20

60561958

60562028

+

hsa-mir-133a-2

20

60572564

60572665

+

Group II

hsa-mir-200b

1

1092347

1092441

+

hsa-mir-200a

1

1093106

1093195

+

hsa-mir-194-1

1

218358122

218358206

-

hsa-mir-375

2

219574611

219574674

-

hsa-mir-31

9

21502114

21502184

-

hsa-mir-192

11

64415185

64415294

-

0.000039

hsa-mir-194-2

11

64415403

64415487

-

hsa-mir-200c

12

6943123

6943190

+

hsa-mir-141

12

6943521

6943615

+

hsa-mir-203

14

103653495

103653604

+

Group III

hsa-mir-219-1

6

33283590

33283699

+

hsa-mir-129-1

7

127635161

127635232

+

hsa-mir-219-2

9

130194718

130194814

-

hsa-mir-129-2

11

43559520

43559609

+

hsa-mir-330

19

50834092

50834185

-

Group IVa

hsa-mir-124a-1

8

9798308

9798392

-

hsa-mir-124a-2

8

65454260

65454368

+

hsa-mir-124a-3

20

61280297

61280383

+

Group IVb

hsa-mir-214

1

170374561

170374670

-

0.000016

hsa-mir-199a-2

1

170380298

170380407

-

hsa-mir-143

5

148788674

148788779

+

hsa-mir-199b

9

130046821

130046930

-

hsa-mir-10a

17

44012199

44012308

-

hsa-mir-199a-1

19

10789102

10789172

-

Group V

hsa-mir-367

4

113788479

113788546

-

hsa-mir-302d

4

113788609

113788676

-

hsa-mir-302a

4

113788788

113788856

-

7.3 × 10-12

hsa-mir-302c

4

113788968

113789035

-

hsa-mir-302b

4

113789090

113789162

-

hsa-mir-499

20

33041840

33041961

+

Group VI

hsa-mir-122a

18

54269286

54269370

+

Group VIIa

hsa-mir-381

14

100582010

100582084

+

hsa-mir-154

14

100595845

100595928

+

hsa-mir-377

14

100598140

100598208

+

hsa-mir-498

19

58869263

58869386

+

hsa-mir-526b

19

58889459

58889541

+

hsa-mir-519b

19

58890279

58890359

+

hsa-mir-526a-1

19

58901318

58901402

+

hsa-mir-524

19

58906068

58906154

+

hsa-mir-517a

19

58907334

58907420

+

hsa-mir-517b

19

58916142

58916208

+

hsa-mir-516-3

19

58920508

58920592

+

0.026

hsa-mir-526a-2

19

58921988

58922052

+

hsa-mir-516-4

19

58931911

58932000

+

hsa-mir-517c

19

58936379

58936473

+

hsa-mir-527

19

58949084

58949168

+

hsa-mir-516-1

19

58951807

58951896

+

hsa-mir-516-2

19

58956199

58956288

+

hsa-mir-371

19

58982741

58982807

+

hsa-mir-503

X

133508024

133508094

-

Group VIIb

hsa-mir-184

15

77289185

77289268

+

hsa-mir-520e

19

58870777

58870863

+

hsa-mir-519e

19

58875006

58875089

+

hsa-mir-520f

19

58877225

58877311

+

hsa-mir-520a

19

58885947

58886031

+

hsa-mir-526b

19

58889459

58889541

+

hsa-mir-523

19

58893451

58893537

+

hsa-mir-520b

19

58896293

58896353

+

hsa-mir-526a-1

19

58901318

58901402

+

hsa-mir-520c

19

58902519

58902605

+

0.026

hsa-mir-518c

19

58903801

58903901

+

hsa-mir-524

19

58906068

58906154

+

hsa-mir-521-2

19

58911660

58911746

+

hsa-mir-526a-2

19

58921988

58922052

+

hsa-mir-518a-1

19

58926072

58926156

+

hsa-mir-518d

19

58929943

58930029

+

hsa-mir-518a-2

19

58934399

58934485

+

hsa-mir-521-1

19

58943702

58943788

+

hsa-mir-372

19

58982956

58983022

+

hsa-mir-373

19

58983771

58983839

+

hsa-mir-450-1

X

133502037

133502127

-

hsa-mir-450-2

X

133502204

133502303

-

Group VIIc

hsa-mir-512-1

19

58861745

58861828

+

hsa-mir-512-2

19

58864223

58864320

+

hsa-mir-515-1

19

58874069

58874151

+

hsa-mir-519e

19

58875006

58875089

+

hsa-mir-515-2

19

58880075

58880157

+

hsa-mir-519c

19

58881535

58881621

+

hsa-mir-520a

19

58885947

58886031

+

hsa-mir-525

19

58892599

58892683

+

hsa-mir-518f

19

58895081

58895167

+

hsa-mir-518b

19

58897803

58897885

+

hsa-mir-518c

19

58903801

58903901

+

hsa-mir-517a

19

58907334

58907420

+

hsa-mir-519d

19

58908413

58908500

+

0.026

hsa-mir-520d

19

58915162

58915248

+

hsa-mir-517b

19

58916142

58916208

+

hsa-mir-520g

19

58917232

58917321

+

hsa-mir-516-3

19

58920508

58920592

+

hsa-mir-518e

19

58924904

58924991

+

hsa-mir-518a-1

19

58926072

58926156

+

hsa-mir-516-4

19

58931911

58932000

+

hsa-mir-518a-2

19

58934399

58934485

+

hsa-mir-520h

19

58937578

58937665

+

hsa-mir-522

19

58946277

58946363

+

hsa-mir-516-1

19

58951807

58951896

+

hsa-mir-516-2

19

58956199

58956288

+

Group VIIIa

hsa-mir-34b

11

110888873

110888956

+

hsa-mir-513-1

X

146102673

146102801

-

hsa-mir-513-2

X

146115036

146115162

-

0.00001

hsa-mir-507

X

146120194

146120287

-

hsa-mir-510

X

146161545

146161618

-

Group VIIIb

hsa-mir-449

5

54502117

54502207

-

hsa-mir-449b

5

54502231

54502327

-

hsa-mir-202

10

134911006

134911115

-

hsa-mir-34b

11

110888873

110888956

+

hsa-mir-34c

11

110889374

110889450

+

hsa-mir-506

X

146119930

146120053

-

hsa-mir-508

X

146126123

146126237

-

hsa-mir-509

X

146149742

146149835

-

0.00001

hsa-mir-514-1

X

146168457

146168554

-

hsa-mir-514-2

X

146171153

146171240

-

hsa-mir-514-3

X

146173851

146173938

-


*Whether each expression group was enriched in miRNAs located in genomic clusters was evaluated by Chi test. miRNAs in different subgroups were analyzed together in one test as long as they are located within a genomic cluster.

Liang et al. BMC Genomics 2007 8:166   doi:10.1186/1471-2164-8-166

Open Data