Table 2

cDNA clones showing homology to genes with characterized or unclassified proteins through Blastx search of the NCBI fungal databases

Category & clone no.

GenBank accession

Size (bp)

Full length or partiala

Best hit in the NCBI databases

Protein

Accession

Organism

e-value


1. Amino acid metabolism

35I14

EG374455

766

F

Cystathionine beta-lyase

gi|6636350

Botryotinia fuckeliana

5.70E+00

2. Cell Defense

66C24a

EG374440

1175

P

88 kDa immunoreactive mannoprotein MP88

gb|AAL87197.1

Cryptococcus neoformans

1.00E-03

3. Cell Division/cycle

10F19

EG374412

1877

F

g1/s-specific cyclin pcl1 (cyclin hcs26)

gb|AAW44590.1

Cryptococcus neoformans

2.00E-04

4. Cell signaling/cell communication

65G15

EG374514

1106

P

Protein kinase

gi|15072451

Cryphonectria parasitica

1.20E+00

30E21

EG374336

1128

F

Serine/threonine kinase

    gi|22531808

Ustilago maydis

3.90E-01

65C6

EG374367

1649

F

Serine/threonine phosphatase

gi|33087517

Hypocrea jecorina

3.90E-01

80G5b

EG374428

1230

P

Mitogen-activated protein kinase

    gi|57227328

Cryptococcus neoformans

1.70E-00

5. Cell Structure and growth

58G9

EG374486

1714

F

Beta tubulin

gi|47834278

Penicillium flavigenum

6.40E-00

40G6b

EG374274

888

P

Cell wall protein

gi|68471254

Candida albicans

4.60E-01

58C4b

EG374296

819

P

Cell surface protein

gi|70983232

Aspergillus fumigatus

2.60E-02

10D19

EG374322

1212

F

Cell wall mannoprotein

ref|NP_012685.1

Saccharomyces cerevisiae

1.00E-03

90I19

EG374406

1240

F

Cell wall mannoprotein

gi|6322611

Saccharomyces cerevisiae

1.50E-02

90C22

EG374402

1641

F

Cytoplasm protein

gb|AAW42379.1

Cryptococcus neoformans

1.00E-04

10I15

EG374326

1088

F

Mitochondrial outer membrane beta-barrel protein

gi|45758780

Neurospora crassa

1.70E-01

60H1

EG374354

1035

F

Nuclear pore complex subunit

gi|46437749

Candida albicans

5.00E-00

70I19a

EG374443

1132

P

Nucleoskeletal-like protein

gi|172053

Saccharomyces cerevisiae

1.30E-01

6. Differentiation- related protein

70A18

EG374371

1207

F

Differentiation-related protein

gb|AAD38996.1

Uromyces appendiculatus

6.00E-03

7. Mating type

30M10

EG374346

1025

F

Mating type alpha locus

gi|73914085

Cryptococcus gattii

6.80E+00

30C22

EG374334

1110

F

Mating type alpha locus

gi|73914085

Cryptococcus gattii

7.50E+00

8. Nucleotide metabolism

35K8

EG374456

1572

F

Ribonuclease H2 subunit

gi|6320485

Saccharomyces cerevisiae

9.00E+00

9. Protein translational modification

100C10

EG374490

1179

F

Non-ribosomal peptide synthetase

gi|62006079

Hypocrea virens

1.20E+00

10. Ribosomal protein complex

35L17

EG374457

585

F

18S ribosomal RNA

gi|51102377

Microbotryum dianthorum

4.20E-02

40C19a

EG374512

706

P

18S ribosomal RNA

gi|28412377

Leotiomycete sp.

5.40E-01

35H2b

EG374500

786

P

26S large subunit ribosomal RNA

gi|30313824

Pichia guilliermondii AjvM13

1.00E-03

35E4

EG374451

897

F

28S ribosomal RNA

gi|46810582

Fuscoporia viticola

5.00E-03

35P11a

EG374506

667

P

28S ribosomal RNA

gi|62005826

Puccinia artemisiae-keiskeanae

1.00E-04

55B15

EG374473

954

F

28S ribosomal RNA

gi|84794517

Puccinia striiformoides

3.60E-01

58B3

EG374484

884

F

28S ribosomal RNA

gi|46810582

Fuscoporia viticola

3.30E-01

58N22

EG374488

996

F

28S ribosomal RNA

gi|20452324

Rhodotorula pilati

3.30E-01

66I12

EG374338

1167

F

28S ribosomal RNA

gi|46810582

Fuscoporia viticola

3.00E-04

80G5a

EG374427

1106

P

Calnexin

gi|45551624

Aspergillus fumigatus

2.30E-00

11. Sugar/glycolysis metabolism

58G18b

EG374304

796

P

Pyruvate decarboxylase

gi|68480982

Candida albicans

1.40E+00

10N6

EG374330

1029

F

Pyruvate kinase

gi|168073

Aspergillus nidulans

6.00E+00

12. Transport metabolism

30G15

EG374339

1087

F

Membrane zinc transporter

gi|47156070

Aspergillus fumigatus

5.70E-01

40H8a

EG374275

656

P

amino acid transporter

gi|70985369

Aspergillus fumigatus

3.10E+00

80K19

EG374395

1728

F

Na+-ATPase

gi|1777377

Zygosaccharomyces rouxii

2.00E-04

55L18b

EG374289

845

P

Peptide transporter

gi|70982509

Aspergillus fumigatus

5.30E-01

13. Unclassified

80G10

EG374391

1132

F

Genomic sequence

gi|48056381

Phakopsora pachyrhizi

7.00E-53

04F9

EG374470

1127

F

Hypothetical protein

gi|71006713

Ustilago maydis

1.00E-06

10N10

EG374331

1106

F

Hypothetical protein

gi|58258450

Cryptococcus neoformans

6.00E-22

30I21

EG374342

1906

F

Hypothetical protein

gi|71023234

Ustilago maydis

1.00E-21

35B6

EG374449

1060

F

Hypothetical protein

gb|EAA67250.1

Gibberella zeae

1.00E-03

35C10

EG374450

1465

F

Hypothetical protein

gi|71004383

Ustilago maydis 521

2.00E-08

35G21

EG374454

1332

F

Hypothetical protein

gb|EAK81105.1

Ustilago maydis

5.00E-09

35H2a

EG374499

758

P

Hypothetical protein

gi|71021872

Ustilago maydis

1.80E+00

40B2a

EG374508

603

P

Hypothetical protein

gi|85114517

Neurospora crassa

3.00E-05

40C12a

EG374510

792

P

Hypothetical protein

gi|71019552

Ustilago maydis

4.00E-01

55L8

EG374491

1417

F

Hypothetical protein

gi|71004813

Ustilago maydis

1.50E-01

58C4a

EG374296

764

P

Hypothetical protein

MGG_09875.5b

Magnaporthe grisea

6.00E-12

60D4

EG374350

1123

F

Hypothetical protein

gi|50259357

Cryptococcus neoformans

7.00E-04

60I14

EG374356

1565

F

Hypothetical protein

gi|58263159

Cryptococcus neoformans

2.00E-09

60L15

EG374359

2073

F

Hypothetical protein

gb|EAA47832.1

Magnaporthe grisea

7.00E-10

60N2

EG374363

1109

F

Hypothetical protein

gi|46096746

Ustilago maydis

7.00E-03

60N6

EG374364

1071

F

Hypothetical protein

gi|49642978

Kluyveromyces lactis

8.00E-17

65H5

EG374374

1390

F

Hypothetical protein

gi|85095053

Neurospora crassa

1.40E+00

65I3

EG374375

1870

F

Hypothetical protein

gb|EAK86140.1

Ustilago maydis

1.00E-129

65O15

EG374381

1893

F

Hypothetical protein

gi|71006255

Ustilago maydis

1.10E+00

66B6

EG374316

1263

F

Hypothetical protein

gb|EAK81690.1

Ustilago maydis

1.00E-03

66B11a

EG374437

1145

P

Hypothetical protein

AN2903.3b

Aspergillus nidulans

3.00E-57

66B11b

EG374438

1200

P

Hypothetical protein

FG10782.1b

Fusarium graminearum

5.00E-49

66C18

EG374327

2043

F

Hypothetical protein

gb|EAA59593.1

Aspergillus nidulans

2.00E-12

70A3

EG374360

1835

F

Hypothetical protein

SS1G_14513.1b

Sclerotinia sclerotiorum

8.00E-18

70C17b

EG374442

1191

P

Hypothetical protein

AN0768.3b

Aspergillus nidulans

1.00E-07

70H16

EG374426

1121

F

Hypothetical protein

gi|38100779

Magnaporthe grisea

2.60E+00

70I19b

EG374443

1190

P

Hypothetical protein

NCU02808.2b

Neurospora crassa

2.00E-08

70K15b

EG374320

933

P

Hypothetical protein

gi|58261561

Cryptococcus neoformans

1.00E-07

70L24b

EG374446

1168

P

Hypothetical protein

gb|EAA28928.1

Neurospora crassa

3.00E-23

80I9

EG374394

1060

F

Hypothetical protein

gi|58259618

Cryptococcus neoformans

1.50E+00

90O3

EG374410

1725

F

Hypothetical protein

gi|85119288

Neurospora crassa

1.20E-02

90O18

EG374411

1973

F

Hypothetical protein

CHG04543.1b

Chaetomium globosum

4.00E-07

66C24b

EG374440

1271

P

Macrofage activating glycoprotein

gi|15722495

Cryptococcus neoformans

3.00E-08

30E3

EG374335

1406

F

Probable gEgh 16 protein

emb|CAE85538.1

Neurospora crassa

8.00E-07

60I8

EG374355

1039

F

Related to ars binding protein 2

gi|18376044

Neurospora crassa

6.60E+00

55J15b

EG374285

896

P

Telomeric sequence DNA

gi|173051

Saccharomyces cerevisiae

2.00E-05

55E7

EG374477

1253

F

Unknown protein in chromosome E

gi|49654999

Debaryomyces hansenii

3.00E-06

55F15a

EG374281

461

P

Unknown protein in chromosome G

gi|50427978

Debaryomyces hansenii

2.00E-03

60L20

EG374361

1646

F

Unknown protein in chromosome VI

gi|39975020

Magnaporthe grisea

3.00E-18

60N1

EG374362

2024

F

Unknown protein in chromosome 1

gi|46110618

Gibberella zeae

2.00E-09

70F20

EG374415

1818

F

Unknown protein in chromosome III

gi|58270250

Magnaporthe grisea

1.60E+00

80M4

EG374396

1985

F

Unknown protein in chromosome G

gi|49657202

Debaryomyces hansenii

1.00E-03

80N10

EG374430

563

P

Phytochrome

gi|57337632

Emericella nidulans

4.30E-00

90B8

EG374400

2011

F

Unknown protein in chromosome G

gi|49657202

Debaryomyces hansenii

4.90E-02

90L21

EG374408

2002

F

Unknown protein in chromosome A

gi|49524079

Candida glabrata

1.20E+00


a F = full-length sequence and P = partial sequence.

b Data generated from Blastx search of the fungal database of the Broad Institute [34].

Ling et al. BMC Genomics 2007 8:145   doi:10.1186/1471-2164-8-145

Open Data