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Conserved syntenic regions with three or more gene pairs between the pseudo-ancestral Arabidopsis genome and Prunus genetic maps. |
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| Peach |
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| Group |
# Pairs |
Arabidopsis |
Putative Function |
EST Name |
BAC Contig |
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| ga18 |
3 |
AT5G47350 |
palmitoyl protein thioesterase family protein |
PP_LEa0012C18f |
FxT-G2F |
| AT4G17720 |
RNA recognition motif (RRM)-containing protein |
PP_LEa0027L14f |
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| AT5G47710 |
C2 domain-containing protein contains |
PP_LEa0011F23f |
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| ga28 |
3 |
AT5G07340 |
calnexin, putative |
PP_LEa0006I23f |
FxT-G3F |
| AT5G07990 |
flavonoid 3'-monooxygenase |
PP_LEa0007M11f |
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| AT5G61580 |
phosphofructokinase family protein |
PP_LEa0001K06f |
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| ga29 |
3 |
AT5G14650 |
polygalacturonase, putative/pectinase, putative |
PP_LEa0030E14f |
FxT-G3F |
| AT3G01610 |
AAA-type ATPase family protein |
PP_LEa0001O24f |
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| AT5G14370 |
expressed protein |
PP_LEa0011N22f |
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| ga54 |
3 |
AT5G59180 |
DNA-directed RNA polymerase II |
PP_LEa0026O17f |
TxE-G1 |
| AT5G59840 |
Ras-related GTP-binding family protein epsin N-terminal homology (ENTH) domain-containing |
PP_LEa0036D15f |
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| AT3G46540 |
PP_LEa0003I01f |
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| ga60 |
4 |
AT2G24640 |
ubiquitin carboxyl-terminal hydrolase family protein |
PP_LEa0006J17f |
TxE-G1 |
| AT4G32400 |
mitochondrial substrate carrier family protein |
PP_LEa0009H16f |
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| AT2G25420 |
transducin family protein |
PP_LEa0009H21f |
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| AT2G25160 |
cytochrome P450 |
PP_LEa0013L12f |
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| ga66 |
3 |
AT4G17720 |
RNA recognition motif (RRM)-containing protein |
PP_LEa0027L14f |
TxE-G2 |
| AT5G47350 |
palmitoyl protein thioesterase family protein |
PP_LEa0012C18f |
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| AT5G47710 |
C2 domain-containing protein |
PP_LEa0011F23f |
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| ga77 |
3 |
AT4G17486 |
expressed protein |
PP_LEa0005J05f |
TxE-G5 |
| AT5G47350 |
palmitoyl protein thioesterase family protein |
PP_LEa0012C18f |
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| AT4G17615 |
calcineurin B-like protein 1 (CBL1) |
PP_LEa0009N08f |
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| ga79 |
3 |
AT5G25170 |
expressed protein |
PP_LEa0005J05f |
TxE-G5 |
| AT5G11110 |
sucrose-phosphate synthase |
PP_LEa0003F22f |
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| AT5G10840 |
endomembrane protein 70, putative TM4 family; |
PP_LEa0015M20f |
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| ga81 |
4 |
AT4G31940 |
cytochrome P450 |
PP_LEa0013L12f |
TxE-G5 |
| AT2G25190 |
expressed protein |
PP_LEa0005J05f |
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| AT2G25160 |
cytochrome P450 |
PP_LEa0013L12f |
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| AT4G31810 |
enoyl-CoA hydratase/isomerase family protein |
PP_LEa0009I06f |
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| ga83 |
3 |
AT1G66540 |
cytochrome P450 |
PP_LEa0013L12f |
TxE-G5 |
| AT1G66250 |
glycosyl hydrolase family 17 protein |
PP_LEa0012I12f |
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| AT1G66680 |
S locus-linked protein |
PP_LEa0003H24f |
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| ga94 |
3 |
AT5G58160 |
formin homology 2 domain-containing protein |
PP_LEa0035A24f |
TxE-G6 |
| AT5G57990 |
ubiquitin-specific protease 23 |
PP_LEa0006J17f |
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| AT5G58590 |
Ran-binding protein 1, putative/RanBP1, putative |
PP_LEa0003G19f |
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| ga95 |
3 |
AT5G01870 |
lipid transfer protein, putative |
PP_LEa0029C22f |
TxE-G6 |
| AT3G08560 |
vacuolar ATP synthase subunit E |
PP_LEa0009M17f |
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| AT3G08710 |
thioredoxin family protein |
PP_LEa0016G12f |
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Jung et al. BMC Genomics 2006 7:81 doi:10.1186/1471-2164-7-81 |
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