Table 2

The number of DEGs is determined at a Bonferroni-adjusted significance level of 0.05 for each of the three microarrays.

Statistics on coverage and detection of differentially expressed genes (DEGs)


Platform

Total Number of Genes

Number of DEGs

Number of DEGs > 2-fold change

Known Imprinted Genes Represented

Number of KnownImprinted Genes Differentially Expressed

% Known Imprinted Genes Differentially Expressed


Affymetrix Human (filtered, 75% quartile)

50,737

4

2

215

2

0.9

Affymetrix Porcine

24,123

210

19

111

13

11.7

Glass Oligonucleotide

13,827

3

2

29

1

3.4


Tsai et al. BMC Genomics 2006 7:328   doi:10.1186/1471-2164-7-328

Open Data