Table 1

Genotyped polymorphisms

Gene (alternative name)
Abbreviation
DbSNP number
Polymorphism position (nt)
PrASE amplicon lenght
PrASE amplicon GC content

serpin peptidase inhibitor, clade E (plasminogen activator inhibitor type 1), member 1
SERPINE1
rs1799768
-675 (4G/5G)
48/49
0.61
nitric oxide synthase 3
NOS3
rs1799983
894 (G/T)
48
0.64
5,10-methylenetetrahydrofolate reductase
MTHFR
rs1801133
667 (C/T)
53
0.48
integrin, beta 3 (platelet glycoprotein IIIa)
ITGB3
rs5918
196 (T/C)
49
0.62
fibrinogen beta chain
FGB
rs1800791
-854 (G/A)
56
0.38
coagulation factor XIII, A1 polypeptide
F13A1
rs5985
163 (G/T)
46
0.69
coagulation factor VII
F7
rs510317
-402 (G/A)
56
0.40
coagulation factor V
F5
rs6025
1691 (G/A)
54
0.45
coagulation factor II (thrombin)
F2
rs1799963
20210 (G/A)
53
0.48
matrix metallopeptidase 3 (stromelysin 1)
MMP3
rs3025058
-1675 (5T/6T)
57/58
0.42

Käller et al. BMC Genomics 2006 7:291   doi:10.1186/1471-2164-7-291