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Criteria for determination of the true positives (TP), false negatives (FN), false positives (FP) and true negatives (TN) for the microarray results. |
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| Microarray Result using the Fs-test |
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| Positive |
Negative |
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|
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| Overall Treatment Effect |
FDR p-value < 0.05 |
FDR p-value > 0.05 |
| AND |
OR |
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| Pairwise Comparison with Control* |
FDR p-value < 0.05 |
FDR p-value > 0.05 |
| RT PCR Result |
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| p-value < 0.05 (differentially expressed) |
TP |
FN |
| p-value > 0.05 (no change) |
FP |
TN |
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* comparison of individual doses against the control | ||
Yauk et al. BMC Genomics 2006 7:266 doi:10.1186/1471-2164-7-266 |
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