Table 4

The HQD count, mean and median phred scores and the HQD count

HQD Type

Count

Mean

Median

Count > 400


Confirmable

86

342.4

163

16

Novel

1364

270.2

136

175

Other

29

233.2

122

4


Counts collected for phred scores > 400 for each of the three HDQ classes: those confirmable by Ensembl, those that occur in positions with no known variations, and those that have incorrect mutations at positions with known variations ("Other").

Bainbridge et al. BMC Genomics 2006 7:246   doi:10.1186/1471-2164-7-246

Open Data