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25 novel alternative splicing events in androgen-stimulated LNCaP cells |
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| Ensembl ID |
Name |
Description |
Splice description |
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| ENST00000248342 |
eIF3k |
Eukaryotic translation initiation factor 3 subunit 12 |
25 bp deletion of 3' end of exon 1 |
| ENST00000207437 |
MLEY_HUMAN |
Myosin light chain 1, slow-twitch muscle A isoform |
64 bp deletion of 5' end of exon 2 (contained in 5' UTR) |
| ENST00000330964 |
RPS27L |
40S ribosomal protein S27-like protein |
Deleteion of retained intron in exon 1 (54 bp of coding sequence) |
| ENST00000358666 |
UBL5 |
Ubiquitin-like protein 5 |
121 bp deletion of 3' end of exon 1 (contained in 5' UTR) |
| ENST00000262746 |
PRDX1 |
Peroxiredoxin 1 |
227 bp deletion of 3' end of exon 1 (contained in 5' UTR) |
| ENST00000297290 |
BRI3 |
Brain protein I3 |
See Figure 3. |
| ENST00000341480 |
MED18 |
Mediator of RNA polymerase II transcription, subunit 18 homolog |
Deletion of retained intron in exon 3 (entriely contained in 3' UTR) |
| ENST00000270799 |
RPL11 |
60S ribosomal protein L11 |
89 bp deletion of 3' end of exon 2 and 103 bp deletion of 5' end of exon 5 |
| ENST00000303553 |
NDUFA3 |
NADH-ubiquinone oxidoreductase B9 subunit |
Deletion of 45 bp retained intron in exon 4 |
| ENST00000222673 |
OGDH (MTpc) |
2-oxoglutarate dehydrogenase E1 component, mitochondrial precursor |
Deletion of 210 bp retained intron (contained in 3' UTR) |
| ENST00000361643 |
This gene can be found on Chromosome MT at location 1,673–3,230. |
Deletion of 47 bps |
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| ENST00000361390 |
ROPN1B (MT) |
NADH-ubiquinone oxidoreductase chain 1 |
Deletion of 648 bp |
| ENST00000302192 |
Q8WUV6_HUMAN |
Podocalyxin-like 2 |
Deletion of 363 bp retained intron in exon 8 |
| ENST00000361643 |
This gene can be found on Chromosome MT at location 1,673–3,230. |
Deletion of 1268 bps |
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| ENST00000261798 |
CSNK1A1 |
Casein kinase I, alpha isoform |
Insertion of unknown length between exons 4 and 5 |
| ENST00000339892 |
This gene can be found on Chromosome 1 at location 234,416,172–234,416,946. |
Deletion of 42 bp in 3' UTR |
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| ENST00000322297 |
OAZ1 |
Ornithine decarboxylase antizyme |
Deletion of last 4 coding bp and 54 bp of 3' UTR |
| ENST00000224892 |
LHPP |
Phospholysine phosphohistidine inorganic pyrophosphate phosphatase |
Deletion of last 105 bp of exon 1, exons 2–6, and first 608 bp of exon 7 |
| ENST00000361381 |
NU4M_HUMAN (MT) |
NADH-ubiquinone oxidoreductase chain 4 |
Deletion of 152 bp |
| ENST00000358666 |
UBL5 |
Ubiquitin-like protein 5 |
80 bp deletion of 3' end of exon 1 (contained in 5' UTR) |
| ENST00000239377 |
PCMT1 |
Protein-L-isoaspartate(D-aspartate) O-methyltransferase |
47 bp deletion of 3' end of exon 7 (10 bp coding, remainder in 5' UTR) |
| ENST00000361899 |
ATP6 (MT) |
ATPase protein 6 |
Deletion of 91 bp |
| ENST00000291565 |
PDXK |
Pyridoxal kinase |
Deletion of 281 bp retained intron (contained in 3' UTR) |
| ENST00000308964 |
This gene can be found on Chromosome 19 at location 60,851,213–60,856,333. |
42 bp deletion of 3' end of exon 2, exons 3–5, and first 541 bp of exon 6 |
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| ENST00000361390 |
ROPN1B(MT) |
NADH-ubiquinone oxidoreductase chain 1 |
Deletion of 346 bp |
Bainbridge et al. BMC Genomics 2006 7:246 doi:10.1186/1471-2164-7-246 |
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