Table 2 |
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|
Enzymes involved in the degradation of complex carbohydrates that appear to have been acquired by HGT. |
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|
Organism |
Accession number |
Annotation |
Domains |
|
|
|||
|
Das. ruminantium |
AM051680 |
6-phospho-beta-glucosidase |
glycosyl hydrolase family 1 |
|
P. multivesiculatum |
AM055068 |
Aldose 1-epimerase precursor |
aldose 1 epimerase |
|
Epi. ecaudatum |
AM053198 |
alpha glucanotransferase |
4-alpha-glucanotransferase |
|
P. multivesiculatum |
AM055071 |
alpha-glucosidase |
no |
|
P. multivesiculatum |
AM055169 |
Alpha-xylosidase |
Glyco_hydro_31 |
|
Iso. prostoma |
AM054399 |
Beta-hexosaminidase |
glycosyl hydrolase family 3, N terminal domain |
|
Epi. ecaudatum |
AM053419 |
carbohydrate esterase |
rhamnogalaturan acetyltransferase |
|
Epi. ecaudatum |
AM053258 |
Cellobiose phosphorylase |
CBM_X |
|
Epi. ecaudatum |
AM053258 |
Cellobiose phosphorylase |
Glyco_transf_36 |
|
Eud. maggii |
AM053819 |
Cellobiose phosphorylase |
CBM_X |
|
Eud. maggii |
AM053819 |
Cellobiose phosphorylase |
Glyco_transf_36 |
|
Eud. maggii |
AM053820 |
Cellobiose phosphorylase |
no |
|
P. multivesiculatum |
AM055116 |
Cellobiose phosphorylase |
no |
|
Epi. ecaudatum |
AM053290 |
cellulase |
Glyco_hydro_5 |
|
Epi. ecaudatum |
AM053291 |
cellulase |
Glyco_hydro_5 |
|
Epi. ecaudatum |
AM053292 |
cellulase |
Glyco_hydro_5 |
|
Epi. ecaudatum |
AM053294 |
cellulase |
Glyco_hydro_5 |
|
Epi. ecaudatum |
AM053295 |
cellulase |
Glyco_hydro_5 |
|
Epi. ecaudatum |
AM053297 |
cellulase |
Glyco_hydro_5 |
|
Epi. ecaudatum |
AM053298 |
cellulase |
Glyco_hydro_9 |
|
P. multivesiculatum |
AM055058 |
cellulase |
endoglucacanase E like |
|
P. multivesiculatum |
AM055119 |
cellulase |
Glyco_hydro_5 |
|
Epi. ecaudatum |
AM053266 |
Chitinase D precursor |
Glyco_hydro_18 |
|
Dip. affine |
AM052171 |
Endo-1,4-beta-xylanase |
Glyco_hydro_10 |
|
Epi. ecaudatum |
AM053241 |
Endo-1,4-beta-xylanase |
Glyco_hydro_10 |
|
M. medium |
AM055031 |
Endo-1,4-beta-xylanase precursor |
Glyco_hydro_11 |
|
M. medium |
AM055032 |
Endo-1,4-beta-xylanase precursor |
Glyco_hydro_11 |
|
Epi. ecaudatum |
AM053745 |
Endo-1,4-beta-xylanase T |
Glyco_hydro_11 |
|
Das. ruminantium |
AM051785 |
Fructokinase |
ROK |
|
Das. ruminantium |
AM051789 |
Fructokinase |
ROK |
|
Ent. caudatum |
AM052478 |
galactoside O-acetyltransferase |
Trimeric LpxA like enzyme family |
|
Epi. ecaudatum |
AM053257 |
glycosidase |
NLPC_P60 |
|
P. multivesiculatum |
AM055193 |
glycosidase |
chitinase_glyco_hydro_19 |
|
Iso. prostoma |
AM054501 |
Lysozyme |
Phage_lysozyme |
|
Epi. ecaudatum |
AM053368 |
Pectate lyase |
no |
|
Epi. ecaudatum |
AM053374 |
Pectate lyase |
no |
|
P. multivesiculatum |
AM055221 |
Pectate lyase |
no |
|
M. medium |
AM054934 |
pectin degradation protein |
no |
|
P. multivesiculatum |
AM055224 |
Polygalacturonase |
Glyco_hydro_28 |
|
Epi. ecaudatum |
AM053746 |
xylanase |
Glyco_hydro_10 |
|
Eud. maggii |
AM053864 |
xylanase |
cellulose binding domain: CBD_IV |
|
Eud. maggii |
AM054010 |
xylanase |
Glyco_hydro_10 |
|
M. medium |
AM055027 |
xylanase |
alpha-L arabinanase |
|
M. medium |
AM055030 |
xylanase |
cellulose binding domain: CBD_II |
|
P. multivesiculatum |
AM055577 |
xylanase |
glycol_hydro_30 |
|
P. multivesiculatum |
AM055581 |
xylanase |
cellulose binding domain: CBD_IV alpha-L arabinanase |
|
|
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|
Ricard et al. BMC Genomics 2006 7:22 doi:10.1186/1471-2164-7-22 |
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