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Gene ontology (GO) functional assignments for the libraries L02, L03, L06 and L10. |
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| GO Term |
GO ID |
L02 |
L03 |
L06 |
L10 |
|
|
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| Biological Process |
GO:0008150 |
809 (100%) |
389 (100%) |
211 (100%) |
472 (100%) |
| Cellular process |
GO:0009987 |
738 (91.2%) |
352 (90.5%) |
196 (92.9%) |
434 (91.9%) |
| Regulation of biological process |
GO:0050789 |
57 (7.0%) |
23 (5.9%) |
12 (5.7%) |
42 (8.9%) |
| Response to stimulus |
GO:0050896 |
39 (4.8%) |
29 (7.5%) |
7 (3.3%) |
31 (6.6%) |
| Physiological process |
GO:0007582 |
778 (96.2%) |
370 (95.1%) |
211 (100%) |
452 (95.8%) |
| Regulation of physiological process |
GO:0050791 |
52 (6.4%) |
20 (5.1%) |
10 (4.7%) |
36 (7.6%) |
| Metabolism |
GO:0008152 |
647 (80.0%) |
303 (77.9%) |
196 (92.9%) |
364 (77.1%) |
| Biosynthesis |
GO:0009058 |
275 (34.0%) |
139 (35.7%) |
119 (56.4%) |
153 (32.4%) |
| Catabolism |
GO:0009056 |
73 (9.0%) |
33 (8.5%) |
6 (2.8%) |
29 (6.1%) |
| Cellular metabolism |
GO:0044237 |
580 (71.7%) |
267 (68.6%) |
181 (85.8%) |
324 (68.5%) |
| Macromolecule metabolism |
GO:0043170 |
392 (48.4%) |
187 (48.1%) |
136 (64.4%) |
228 (48.3%) |
| Nitrogen compound metabolism |
GO:0006807 |
90 (11.1%) |
32 (8.2%) |
17 (8.1%) |
40 (8.5%) |
| Primary metabolism |
GO:0044238 |
533 (65.9%) |
249 (64.0%) |
170 (80.6%) |
301 (63.6%) |
| Regulation of metabolism |
GO:0019222 |
42 (5.2%) |
15 (3.9%) |
7 (3.3%) |
28 (5.9%) |
| Secondary metabolism |
GO:0019748 |
11 (2.8%) |
3 (0.8%) |
0 |
2 (0.4%) |
|
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| Molecular Function |
GO:0003674 |
837 (100%) |
389 (100%) |
228 (100%) |
483 (100%) |
| Binding activity |
GO:0005488 |
400 (47.8%) |
165 (42.4%) |
107 (46.9%) |
223 (46.2%) |
| Cofactor binding |
GO:0048037 |
33 (3.9%) |
15 (3.9%) |
5 (2.2%) |
16 (3.3%) |
| Ion binding |
GO:0043167 |
78 (9.3%) |
34 (8.7%) |
12 (5.3%) |
46 (9.5%) |
| Nucleic acid binding |
GO:0003676 |
150 (17.9%) |
65 (16.7%) |
52 (22.8%) |
82 (17.0%) |
| Nucleotide binding |
GO:0000166 |
133 (15.9%) |
57 (14.7%) |
32 (14.0%) |
61 (12.6%) |
| Protein binding |
GO:0005515 |
54 (6.5%) |
16 (4.1%) |
18 (7.9%) |
26 (5.4%) |
| Catalytic activity |
GO:0003824 |
491 (58.7%) |
232 (59.6%) |
106 (46.5%) |
284 (58.8%) |
| Hydrolase activity |
GO:0016787 |
162 (19.4%) |
81 (20.8%) |
33 (14.5%) |
119 (24.6%) |
| Lyase activity |
GO:0016829 |
50 (6.0%) |
23 (5.9%) |
4 (1.8%) |
15 (3.1%) |
| Ligase activity |
GO:0016874 |
38 (4.5%) |
18 (4.6%) |
9 (3.9%) |
17 (3.5%) |
| Oxidorreductase activity |
GO:0016491 |
158 (18.9%) |
71 (18.3%) |
30 (13.2%) |
78 (16.1%) |
| Transferase activity |
GO:0016740 |
124 (14.8%) |
50 (12.9%) |
31 (13.6%) |
56 (11.6%) |
| Transporter activity |
GO:0005215 |
121 (14.5%) |
57 (14.7%) |
18 (7.9%) |
80 (16.6%) |
| Carrier activity |
GO:0005386 |
70 (8.4%) |
32 (8.2%) |
13 (5.7%) |
49 (10.1%) |
| Ion transporter activity |
GO:0015075 |
50 (6.0%) |
22 (5.7%) |
12 (5.3%) |
36 (7.5%) |
| Signal transducer activity |
GO:0004871 |
16 (1.9%) |
7 (1.8%) |
5 (2.2%) |
13 (2.7%) |
| Structural molecule activity |
GO:0005198 |
80 (9.6%) |
47 (12.1%) |
63 (27.6%) |
41 (8.5%) |
| Enzyme regulator activity |
GO:0030234 |
18 (2.2%) |
13 (3,3%) |
5 (2.2%) |
12 (2.5%) |
| Transcription regulator activity |
GO:0030528 |
17 (2.0%) |
8 (2.1%) |
5 (2.2%) |
12 (2.5%) |
| Translation regulator activity |
GO:0045182 |
52 (6.2%) |
22 (5.7%) |
21 (9.2%) |
42 (8.7%) |
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| Cellular component |
GO:0005575 |
563 (100%) |
280 (100%) |
156 (100%) |
316 (100%) |
| Extracellular region |
GO:0005576 |
26 (4.6%) |
18 (6.4%) |
1 (0.6%) |
21 (6.6%) |
| Cell |
GO:0005623 |
539 (95.7%) |
266 (95.0%) |
151 (96.8%) |
300 (94.9%) |
| Intracellular |
GO:0005622 |
441 (78.3%) |
211 (75.4%) |
145 (92.9%) |
235 (74.4%) |
| Membrane |
GO:0016020 |
180 (32.0%) |
97 (34.6%) |
24 (15.4%) |
112 (35.4%) |
Vizcaíno et al. BMC Genomics 2006 7:193 doi:10.1186/1471-2164-7-193 |
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