Table 3

Members of the myosin light chain, calmodulin and calmodulin-related gene superfamily in D. discoideum.

Protein name

Gene name

Size in aa

No. of introns

Chr.

Gene accession (GenBank)

Protein accession (GeneBank)

dictyBaseID (DDB...)

References, comments


ELC

mlcE

150

1

3

AAFI01000052

EAL68102

0214813

[56, 57]

RLC

mlcR

161

2

2

AAFI01000032

EAL69338

0185146

[58]

MlcB

BC5V2_0_01417

73

2

5

AAFI01000224

EAL62399

0188713

[19]

MlcD

mlcD

147

2

3

AAFI01000052

EAL68131

0214812

[18]

MLC1

BC5V2_0_01163

80

2

5

AAFI01000214

EAL62662

0219456

CalA

calA

152

3

3

AAFI01000060

EAL67642

0214955

[59]

CalB

calB

149

2

1

AAFI01000011

EAL71901

0191193

[60]

Calcineurin1

BC4V2_0_01538

183

3

4

AAFI01000129

EAL64441

0218775

Calcineurin2

cnbA

180

3

1

AAFI01000009

EAL73175

0191204

CBP1

cbpA

156

1

2

AAFI01000042

EAL68881

0185026

[61]

CBP2

CBP2

168

2

1

AAFI01000009

EAL73181

0191196

[62]

CBP3

cbpC

166

3

4

AAFI01000093

EAL65573

0191405

[63], cluster with cbpC, cbpG, cbpF, CBP14

CBP4a

cbpD1

162

3

4

AAFI01000087

EAL65815

0219925

[64]

CBP4b

cbpD2

162

3

4

AAFI01000086

EAL65870

0191416

[64]

CBP4c

BC4V2_0_01277

145

2

4

AAFI01000124

EAL64575

0186519

pseudogene?

CBP5

cbpE

180

2

2

AAFI01000027

EAL69942

0185183

[37]

CBP6

cbpF

174

3

4

AAFI01000093

EAL65572

0191383

[37]

CBP7

cbpG

169

3

4

AAFI01000093

EAL65571

0191382

[37]

CBP8

cbpH

165

2

5

AAFI01000181

EAL63115

0191153

[37]

CBP9

cbpI

163

3

2

AAFI01000022

EAL71051

0185027

[37]

CBP10

JC2V2_0_03060

107

0

2

AAFI01000044

EAL68782

0169106

CBP11

BC4V2_0_02040

192

1

4

AAFI01000145

EAL63932

0187233

No EST

CBP12

BC4V2_0_00355

171

3

4

AAFI01000093

EAL65589

0185595

CBP13

BC4V2_0_00374

102

1

4

AAFI01000093

EAL65599

0185615

pseudogene?

CBP14

BC4V2_0_01173

139

1

4

AAFI01000121

EAL64796

0186418

Frequenin1

cbpJ

194

1

1

AAFI01000011

EAL72455

0231009

[65]

Frequenin2

cbpK

192

1

2

AAFI01000027 AY655132

EAL70072 AAT72748

0167922

[65]

Frequenin3

cbpL

191

2

5

AAFI01000187

EAL63014

0231012

[65]

Frequenin4

cbpM

183

2

4

AAFI01000135

EAL64210

0231014

[65]

Frequenin5

ncsA

186

2

2

AAFI01000030

EAL69716

0231007

[65]

Frequenin6

JC2V2_0_01524

185

1

2

AAFI01000027

EAL70071

0167921

cluster with cbpK

Frequenin7

JC2V2_0_01529

225

3

2

AAFI01000027

EAL70283

0217470

Calfumirin

cafA

169

3

3

AAFI01000052

EAL68086

0214954

[66]

CentrinA

cenA

151

3

5

AAFI01000171

EAL63239

0219932

CentrinB

cenB

150

1

5

AAFI01000056

EAL67875

0220501


Kollmar BMC Genomics 2006 7:183   doi:10.1186/1471-2164-7-183

Open Data