Table 2

Files extracted from TAIR FTP site [55]. Due to the small amount of miss-annotation that may interface with the bioinformatics analysis, UTRs less that 4 nt in length and introns less than 6 nt in length were excluded from the analysis.

File

Type of data


ATH1_3_UTR_20050325

Coordinates and sequences of 3'UTRs

ATH1_5_UTR_20050325

Coordinates and sequences of 5'UTRs

At_intron_20050330

Coordinates and sequences of introns

Sv_gene_feature.data

Coordinates of CDSs, ORFs, exons and genes

ATH1_chr1.1con.01222004

Chromosome 1 – complete sequence

ATH1_chr2.1con.01222004

Chromosome 2 – complete sequence

ATH1_chr3.1con.01222004

Chromosome 3 – complete sequence

ATH1_chr4.1con.01222004

Chromosome 4 – complete sequence

ATH1_chr5.1con.04172003

Chromosome 5 – complete sequence


Chung et al. BMC Genomics 2006 7:120   doi:10.1186/1471-2164-7-120

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