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List of the PCR primers used. |
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| Target DNA |
Name |
5'→3' sequencea |
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| Plant F3'H |
F3'H_S |
CCIGTIAANYTNGGNCARYTIBTIAA |
| Plant F3'H |
F3'H_AS |
GCICKYTGIARIGTNARNCCRTA |
| Plant F3'5'H |
F3'5'H_S |
ATGCTGACNTAYGCIATGGCNAAYATG |
| Plant F3'5'H |
F3'5'H_AS |
CGAARTCRTTICCYCKNGGNTCDATYTT |
| Grape F3'H |
VvF3'H_S |
ATTCGCCACCCTGAAATGAT |
| Grape F3'H |
VvF3'H-indel_S |
CAACAAGAGCTGGACGCAGT |
| Grape F3'H |
VvF3'H_AS |
AGCCGTTGATCTCACAGCTC |
| Grape F3'5'H |
Vv3'5'H-1A_S |
GAAGTTCGACTGGTTATTAACAAAGAT |
| Grape F3'5'H |
VvF3'5'H-1A_AS |
AGGAGGAGTGCTTTAATGTTGGTA |
| Grape F3'5'H |
Vv3'5'H-2A_S |
AAGAAGTTCGACAAGTTATTGACAAG |
| Grape F3'5'H |
Vv3'5'H-2A_AS |
AGCGCCTTAATGTTGGTAAGG |
| Grape F3'H |
VvF3'H-intron_S |
CGTTGATCTCGCTGAAGGAT |
| Grape F3'H |
VvF3'H-intron_AS |
ATCATTTCAGGGTGGCGAAT |
| Grape F3'5'H |
Vv3'5'H-1A-intron_S |
GCTCACTATTACCAACATTAAAGCA |
| Grape F3'5'H |
Vv3'5'H-2A-intron_S |
AAGCTCACCCTTACCAACATTAAG |
| Grape F3'5'H |
Vv3'5'H-intron_AS |
GGCAAGTCAGACTCCACGAG |
| BES38C24-FM |
38C24-FM_S |
TGGCCTTCATTTTGGTTAGC |
| BES38C24-FM |
38C24-FM_AS |
TCATCACTCAGGGCACAAAA |
| BES38C24-RM |
38C24-RM_S |
TTACCGCCCTTGTCCTTGTA |
| BES38C24-RM |
38C24-RM_AS |
GCGTATTGATCATCCCTTGG |
| BES17K4-FM |
17K4-FM_S |
CCAATATGTGGAGGAGGAACA |
| BES17K4-FM |
17K4-FM_AS |
CATCCAGGTTGTGAAGGACA |
| BES9C17-FM |
9C17-FM_S |
AGGAGGCCTATGCATCAGAA |
| BES9C17-FM |
9C17-FM_AS |
GGAGCACCATTAAAGGCAAA |
| BES40A22-FM |
40A22-FM_S |
CTAATGGGCATCAGGTTTCG |
| BES40A22-FM |
40A22-FM_AS |
CGTGCATATCATTTTCTTCCAA |
| BES5A23-FM |
5A23-FM_S |
TTCAAGAAGTGGAGGCTGCT |
| BES5A23-FM |
5A23-FM_AS |
AGCACTGACTGCCTGATCCT |
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a Degenerate IUB code: I = inosine; R = A or G; M = A or C; W = A or T; Y = C or T; S = C or G; D = A, G or T; N, A, C, G or T. | ||
Castellarin et al. BMC Genomics 2006 7:12 doi:10.1186/1471-2164-7-12 |
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