Additional File 1.

Supplementary Figure S1 (Supplementary Fig S1 Window size vs domain gene number.ppt). Plots of the means of the coexpression index calculated from the real genome data set (blue line) and 10,000 randomized genome data sets (red line) under the neighboring gene numbers of 4 to 50. The mean coexpression index decreased greatly when the domain size increased from 2 to 20 neighbor genes. Beyond 20 neighboring genes, the decrease of the coexpression level was slower, and this trend continued for domains of up to 50 neighboring genes. A. Plot based on the expression data in ES; B. Plot based on the expression data in EB.

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Li et al. BMC Genomics 2006 7:103   doi:10.1186/1471-2164-7-103