Table 2

Most abundantly represented protein domains in A. caninum and A. ceylanicum datasets

Species

InterPro ID

Clusters #

Domain descriptor


A. caninum

IPR001230

141

Prenyl group, CAAX box, attachment site

IPR001687

66

ATP/GTP-binding site motif A (P-loop)

IPR000694

62

Proline-rich region

IPR001472

51

Bipartite nuclear localization signal

IPR000345

29

Cytochrome c heme-binding site

IPR001283

25

Allergen V5/Tpx-1 related

IPR002048

24

Calcium-binding EF-hand

IPR000504

21

RNA-binding region RNP-1 (RNA recognition motif)

IPR000719

19

Protein kinase

IPR007087

17

Zn-finger, C2H2 type

A. ceylanicum

IPR000694

214

Proline-rich region

IPR001230

153

Prenyl group, CAAX box, attachment site

IPR001687

125

ATP/GTP-binding site motif A (P-loop)

IPR000345

50

Cytochrome c heme-binding site

IPR006209

48

EGF-like domain

IPR000504

37

RNA-binding region RNP-1 (RNA recognition motif)

IPR001283

34

Allergen V5/Tpx-1 related

IPR001472

32

Bipartite nuclear localization signal

IPR000169

32

Eukaryotic thiol (cysteine) protease

IPR001534

27

Transthyretin-like


Mitreva et al. BMC Genomics 2005 6:58   doi:10.1186/1471-2164-6-58

Open Data