Table 2

Gene Ontology classification of Apis mellifera ORESTES contigs according to the Drosophila genes that they represent.

Gene Ontology

Number of genes


Cellular Component

extracellular matrix

4

extracellular space

5

intracellular

99

membrane

29

others

8

Biological Process

reproduction

18

cell motility

7

response to stress

6

cell communication

25

pattern specification

10

cell growth and/or maintenance

55

metabolism

79

response to external stimulus

10

morphogenesis

24

embryonic development

9

cell differentiation

9

others

41

Molecular Function

nucleotide binding

14

nucleic acid binding

40

RNA polymerase II transcription factor activity

7

antimicrobial peptide activity

3

helicase activity

4

receptor signaling protein activity

5

structural constituent of cytoskeleton

5

microfilament motor activity

5

transcription factor activity

6

kinase activity

14

oxidoreductase activity

22

transferase activity

23

hydrolase activity

38

protein binding

29

metal ion binding

9

ion transporter activity

8

others

70


GO levels were set at 3. In either of the GO categories, individual contigs may be listed in more than one category. This GO classification only includes Apis mellifera orthologs to Drosophila genes that are represented by a Flybase code.

Nunes et al. BMC Genomics 2004 5:84   doi:10.1186/1471-2164-5-84

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