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Open Access Methodology article

Predicting N-terminal myristoylation sites in plant proteins

Sheila Podell12* and Michael Gribskov12

Author Affiliations

1 San Diego Supercomputer Center, University of California San Diego, La Jolla CA 92093-0537, USA

2 Department of Biology, University of California San Diego, La Jolla CA 92093-0537, USA

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BMC Genomics 2004, 5:37  doi:10.1186/1471-2164-5-37

Published: 17 June 2004

Additional files

Additional File 1:

This file is an 85 page PDF format document containing six tables that were too large to be included in the main text. Supplementary Table 1. 80 plant proteins used in myristoylation classified positive set. Supplementary Table 2. 185 plant proteins used in myristoylation classified negative set. Supplementary Table 3. 348 plant proteins used in to supplement myristoylation positive training set to build a second generation of HMMs. Supplementary Table 4. 319 Arabidopsis thaliana proteins predicted to contain N-terminal myristoylation sites. Supplementary Table 5. 268 non-Arabidopsis plant proteins predicted to contain N-terminal myristoylation sites. Supplementary Table 6. 301 predicted internal myristoylation sites in Arabidopsis thaliana.

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