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An improved genome release (version Mt4.0) for the model legume Medicago truncatula

Haibao Tang1, Vivek Krishnakumar1, Shelby Bidwell1, Benjamin Rosen1, Agnes Chan1, Shiguo Zhou2, Laurent Gentzbittel3, Kevin L Childs4, Mark Yandell5, Heidrun Gundlach6, Klaus FX Mayer6, David C Schwartz2 and Christopher D Town1*

Author Affiliations

1 J. Craig Venter Institute, 9704 Medical Center Drive, Rockville, MD, USA

2 Laboratory for Molecular and Computational Genomic, Department of Chemistry, University of Wisconsin-Madison, Madison, WI, USA

3 Université de Toulouse, INP-ENSAT, CNRS, Laboratoire d’Écologie Fonctionnelle et Environnement, Toulouse, France

4 Department of Plant Biology, Michigan State University, East Lansing, MI, USA

5 Department of Human Genetics, University of Utah, Salt Lake City, Utah, USA

6 MIPS/IBIS Inst. for Bioinformatics and System Biology, Helmholtz Center Munich, German Research Center for Environmental Health (GmbH), Neuherberg, Germary

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BMC Genomics 2014, 15:312  doi:10.1186/1471-2164-15-312

Published: 27 April 2014

Additional files

Additional file 1: Table S1:

Available RNA-seq data used in Mt4.0 for UTR and isoform instantiation. Table S2. Classification of genes into high and low confidence classes.

Format: DOCX Size: 15KB Download file

Open Data