Additional file 1.

Supplementary material. This PDF file contains supplementary data for this paper. Section 1 - Command lines used for each of the tested mappers and for read generation. Section 2 - Description of CuReSim, the customizable read simulator, and CuReSimEval, the program to evaluate the mapping quality. Section 3 - additional figures. Section 4 - presents additional experiments.

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Caboche et al. BMC Genomics 2014 15:264   doi:10.1186/1471-2164-15-264