This article is part of the supplement: Selected articles from ISCB-Asia 2012
iSeeRNA: identification of long intergenic non-coding RNA transcripts from transcriptome sequencing data
1 Li Ka Shing Institute of Health Sciences, The Chinese University of Hong Kong, Shatin, New Territories, Hong Kong SAR, China
2 Departments of Chemical Pathology, The Chinese University of Hong Kong, Shatin, New Territories, Hong Kong SAR, China
3 Department of Obstetrics and Gynaecology, The Chinese University of Hong Kong, Shatin, New Territories, Hong Kong SAR, China
4 Department of Biomedical Engineering, Nanjing University of Aeronautics and Astronautics, Nanjing 210016, China
BMC Genomics 2013, 14(Suppl 2):S7 doi:10.1186/1471-2164-14-S2-S7Published: 15 February 2013
Additional file 1:
Details of conservation score and the blastx score for the comparison dataset.
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Additional file 2:
Comparison of the potential for each feature on the discrimination of lincRNAs (red) from PCTs (green). The calculated feature values were normalized to values between 0 and 1. Each feature can distinguish lincRNAs from PCTs to some extension. Exon cons (exon conservation score) and ORF proportion shows the highest discrimination power among all the features.
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