Correlation of milk and mammary transcriptomes. Each square in the heatmap represents the pairwise correlation of the sample listed in the row compared with the sample listed in the column. The shades of blue across the top of each heatmap correspond to sample type. The colors on the left side of each heat map correspond to each individual monkey. Both biological and technical replicates are shown. All technical replicates appear as clustered triplets in the dendograms. (A) Milk fat vs mammary biopsy samples; dark blue denotes biopsy, light blue denotes milk fat. (B) Milk cells vs mammary biopsy samples, dark blue denotes milk cell, light blue denotes milk fat. (C) Milk cells vs milk fat samples, dark blue denotes milk cell, blue denotes biopsy. (D) Mammary biopsy samples at day 30 and day 90. (E) Milk fat samples at day 30 and day 90. (F) Milk cells samples at day 30 and day 90. (D–F) Dark and light blue distinguish day 30 and 90 samples.
Lemay et al. BMC Genomics 2013 14:872 doi:10.1186/1471-2164-14-872