Table 2

Repetitive elements identified by RepeatMasker in the sequences of BAC clones
Repetitive content Percentage share
055L12[EMBL:HE804809] 067H16[EMBL:HE804811] 004G15[EMBL:HE804808] 057J20[EMBL:HE804810] 080B11[EMBL:HE804812]
Retrotransposons 38.2% 32.7% 6.9% 17.3% -
LINE 0.8% - 0.5% 6.8% -
Ty1/Copia 30.3% 6.0% - 4.8% -
Ty3/Gypsy 7.0% 26.7% 6.4% 5.8% -
Transposons 2.8% 0.6% 0.1% 0.4% -
En-Spm 2.3% - - - -
MuDR 0.5% - 0.1% 0.0% -
hobo-Activator - 0.6% - - -
RC/Helitron - - - 0.4% -
Unclassified - 0.1% 0.5% 0.3% -
Total interspersed repeats 41.0% 33.4% 7.5% 18.0% -
Simple repeats: 0.1% 0.2% 0.1% - 0.1%

Książkiewicz et al.

Książkiewicz et al. BMC Genomics 2013 14:79   doi:10.1186/1471-2164-14-79

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