Table 2

Characteristics of polymorphic microsatellite loci isolated from M. acuminata Calcutta 4 and Cavendish Grande Naine unigene sets
Locus number Unigene ID SSR repeat motif SSR locus length (bp) Allelic Amplitude (bp) Number of alleles He Ho PIC Value
locus821 musa_c4_small_c22955 CGG 14 170-180 3 0.61 0.52 0.53
locus945 musa_c4_small_c25361 TGACA 17 325-330 3 0.62 0.57 0.55
locus1284 musa_c4_small_c7084 AG 11 270-330 6 0.77 0.65 0.74
locus1412 musa_c4_small_c8798 TGC 15 175-190 3 0.39 0.14 0.34
locus1654 musa_c4_small_rep_c12642 CCT 16 170-200 5 0.70 0.71 0.66
locus2108 musa_c4_small_rep_c2099 GA 14 190-220 7 0.81 0.92 0.79
locus2061 musa_c4_small_rep_c1992 AG 19 190-200 5 0.70 0.52 0.66
locus2108 musa_c4_small_rep_c2099 GA 14 205-230 8 0.84 0.91 0.82
locus2112 musa_c4_small_rep_c21184 GTC 18 200-205 3 0.52 0.65 0.46
locus2306 musa_c4_small_rep_c2740 TG 13 170-185 4 0.74 0.38 0.69
locus2984 musa_c4_clusters_pos_c1484_1 TCCT 13 115-130 7 0.80 0.45 0.77
locus371 musa_cav_c18572 AT 12 350-360 3 0.56 0.54 0.48
locus2028 musa_cav_rep_c22610 CTT 17 280-290 4 0.70 0.75 0.65
locus2646 musa_cav_rep_c5186 TTC 18 200-220 5 0.73 0.30 0.68

Polymorphism was evaluated across 21‚ÄČM. acuminata accessions. HE, expected heterozygosity under Hardy-Weinberg expectations; HO, observed heterozygosity; PIC, Polymorphism Information Content.

Passos et al.

Passos et al. BMC Genomics 2013 14:78   doi:10.1186/1471-2164-14-78

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