Table 4

Correlation between smRNAs and mRNAs (Spearman’s Rho > +0.8 or < −0.8) over 9 experimental treatments (21 smRNAs, 19,893 annotated mRNAs, 417,753 comparisons)
smRNAs No. of genes
Negative correlation Positive correlation Total
smb123 235 363 598
smb83 237 172 409
smb359 134 188 322
smb21 116 196 312
smb107.3 208 91 299
smb303 149 138 287
smb101 189 76 265
smb107.2 157 106 263
smb215 104 108 212
smb297 86 113 199
smb427 114 74 188
smb79 92 69 161
smb51 70 85 155
smb295 101 39 140
smb163 47 71 118
smb365 43 51 94
smb271 31 60 91
smb203 41 35 76
smb313 17 50 67
smb379 30 36 66
smb41 34 32 66
Total no. genes 2,235 2,153 4,388
Distinct no. genes 1,673 1,602 3,502

Baumgarten et al.

Baumgarten et al. BMC Genomics 2013 14:704   doi:10.1186/1471-2164-14-704

Open Data