Table 4

Functional classification of allele-specific expression (ASE) SNPs in response to Marek’s disease virus infection from broilers and layers in known genes
SNP type Broiler Layer Common
SNPs % of SNPs Gene SNPs % of SNPs Gene Gene
Nonsynonymous 442 24.3 399 317 27.3 291 14
Stop gain 4 0.2 4 5 0.4 5 0
Stop loss 2 0.1 2 1 0.1 1 0
Synonymous 1,370 75.4 936 840 72.2 735 162
Total 1,818 100 1,341 1,163 100 1,032 176

Perumbakkam et al.

Perumbakkam et al. BMC Genomics 2013 14:64   doi:10.1186/1471-2164-14-64

Open Data