Table 2

Nr annotations and RPKM values of 16 selected candidate RNAi target genes in alimentary canal of grain aphid
Unigene no. Nr-annotation RPKM value of the unigene in Chuli RPKM value of the unigene in Duizhao Log 2 ratio (Chuli RPKM/Duizhao RPKM)
Unigene_6994 Synaptotagmin 4 [Acyrthosiphon pisum] 54.8647 35.322 0.64
Unigene_ 8273 Similar to cuticular protein CPG12 [Acyrthosiphon pisum] 1454.892 641.2085 1.18
Unigene_ 8279 Similar to CG10625 [Acyrthosiphon pisum] 1967.559 554.559 1.83
Unigene_11975 Hypothetical repeat protein [Leishmania infantum] 17.2449 4.6812 1.88
Unigene_21088 cytochrome c oxidase subunit VIIc precursor [Acyrthosiphon pisum] 3463.178 7555.03 −1.13
Unigene_21789 No orthologs identified 1987.456 886.7044 1.16
Unigene_23028 Similar to zinc finger protein [Acyrthosiphon pisum] 6.0578 0.0 Only in Chuli
Unigene_23042 Similar to AGAP007992-PA, partial sequence [Acyrthosiphon pisum] 6.0346 0.0 Only in Chuli
Unigene_23235 Similar to defective proboscis extension response [Tribolium castaneum] 5.4287 0.0 Only in Chuli
Unigene_ 26956 No orthologs identified 0.0 98.1775 Only in Duizhao
Unigene_ 27357 Similar to proteophosphoglycan ppg1 [Acyrthosiphon pisum] 1481.846 525.2179 1.49
Unigene_ 27882 Similar to neurofilament, heavy polypeptide isoform 2 [Acyrthosiphon pisum] 1602.747 751.6207 1.09
Unigene_ 28447 No orthologs identified 1861.09 494.6134 1.91
Unigene_28469 No orthologs identified 2775.923 174.3591 3.99
Unigene_ 28555 ACYPI002010 [Acyrthosiphon pisum] 2321.885 681.4342 1.76
Unigene_ 29698 No orthologs identified 0.0 98.4885 Only in Duizhao

Zhang et al.

Zhang et al. BMC Genomics 2013 14:560   doi:10.1186/1471-2164-14-560

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