Table 3

Major transcription factor families identified by conserved domain annotation
Transcription factors identified by KOG/InterPro/GO annotation in Fav1
Sequence description Sequences(n)
CBF 1
Transcriptional Coactivator P50 1
Transcriptional Coactivator P100 6
Transcriptional Coactivator CAPER 2
Homeobox domain 7
HSF-type DNA-binding 1
P53 DNA-binding domain 2
NF-X1-type zinc finger protein 3
Dimerization partner (TDP) 2
Fork head 15
Basic region leucine zipper & bZIP 6
Helix-loop-helix DNA binding domain 12
Myb-like DNA-binding domain 3
Zinc finger C2H2 type 3
Zinc finger MIZ type 1
HMG box 12
TBOX 5
ETS domain 12
MADS domain 4

Pooyaei Mehr et al.

Pooyaei Mehr et al. BMC Genomics 2013 14:546   doi:10.1186/1471-2164-14-546

Open Data