Table 4

Results of BLAST search for the putative gene set
Database No. of hit (rate of hits) Avg. query coverage Avg. subject coverage
Non-redundant protein database
NCBI nr 25,290 (77.1%) 72.4% 40.5%
Gene set of insects
Bombyx mori 27,659 (84.3%) 69.0% 39.8%
Manduca sexta 29,556 (90.1%) 71.0% 36.2%
Danaus plexippus 29,518 (90.0%) 72.0% 36.4%
Drosophila melanogaster 21,281 (64.9%) 69.2% 34.9%
Tribolium castaenum 23,045 (70.3%) 69.6% 35.7%
Apis mellifera 21,599 (65.9%) 68.3% 35.7%
Acyrthosiphon pisum 21,414 (65.3%) 68.5% 35.8%
Anopheles gambiae 21,587 (65.8%) 68.6% 35.5%
Unigenes of lepidopteran insects
Spodoptera frugiperda 13,399 (40.9%) 46.4% 40.3%
Heriothis Virescens 16,278 (49.6%) 44.9% 38.9%

The average query coverage was calculated by dividing the aligned length by the length of a query sequence (a putative gene of DBM). Similarly, the average subject coverage was calculated by dividing the aligned length by the length of a subject sequence (a sequence of the target database).

Jouraku et al.

Jouraku et al. BMC Genomics 2013 14:464   doi:10.1186/1471-2164-14-464

Open Data